Name : Nhal_1283 (Nhal_1283) Accession : YP_003526824.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : integron integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1272427 - 1273392 bp Length : 966 bp Strand : + Note : TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: tbd:Tbd_1215 integron integrase DNA sequence : ATGGCAAAATCCCCTTTTTTAGAGCAGGTTCGCCAAGCCATCCGTGTTCGCCATTTCAGTATCCGAACGGAACAGGCGTA TGTGGCTTGGATTAAGCGCTTTATTCTCTTTCACCAAAGACGTCATCCCCTTGAGATGGGCGAGCGGGAAGTCTCCGAAT TTTTGACTTATCTGGCTTGTCAGAAGCATGTAGCAGCTTCGACACAAAACCAGGCACTGAATGCTTTGGTTTTTCTTTAC CGAGAAGTTTTGGAACGGCCGCTAGGCGATCTCGCCAATGTGGTGAGGGCGAAAAAACCTCAGCGCTTGCCGGTGGTGTT GAGCCGAGAAGAAGTTTCTCGATTACTGGGGGAATTGGAAGGAGAGCAGTGGTTGATGGCAAGCCTGCTCTACGGTTCAG GCTTGCGTTTAATGGAATGTATGCGATTGCGGGTTAAGGATATCGATTTTGAGCGCCAAGCCATAGGGGTGCGAGAAGGG AAAGGGCGGAAAGATCGCGTCACCTTGTTGCCTGAGCCCTTGATCGTCCCCCTTAAGCGTCACCTGGCCACGGTCAAGAC GTGGCACGAGCGGGATTTAGCACAGGGCTTTGGAGCCGTGTATCTTCCTTATGCCCTAGAGCGCAAATATCCCCAGGCCA ATAAGGAGTGGGGGTGGCAATATGTGTTTCCAGCGCCGAAGCGTTCCGTGGACCCCCGGACAAAATTGGTCCGGCGGCAT CATTACTATGAAAAGACCTTGCAAGCCGCCATAAGAAAAGCGGTGCGGCGCGCCCGGATTGAGAAACCGGCCAGTTGCCA TACCCTGCGCCATTCTTTTGCAACCCACCTTTTAGAAAGCGGCTATGACATTCGCACGGTTCAGGAATTGTTAGGTCATC AAGATATTCGCACCACCCAGATTTACACCCATGTGCTCAAACGGGGCGGGAATGCTGTGATAAGTCCTTTGGCTATGCTG TCGTAA Protein sequence : MAKSPFLEQVRQAIRVRHFSIRTEQAYVAWIKRFILFHQRRHPLEMGEREVSEFLTYLACQKHVAASTQNQALNALVFLY REVLERPLGDLANVVRAKKPQRLPVVLSREEVSRLLGELEGEQWLMASLLYGSGLRLMECMRLRVKDIDFERQAIGVREG KGRKDRVTLLPEPLIVPLKRHLATVKTWHERDLAQGFGAVYLPYALERKYPQANKEWGWQYVFPAPKRSVDPRTKLVRRH HYYEKTLQAAIRKAVRRARIEKPASCHTLRHSFATHLLESGYDIRTVQELLGHQDIRTTQIYTHVLKRGGNAVISPLAML S |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
intI1 | AFL65913.1 | class 1 integrase | Not tested | SGI1-J6 | Protein | 1e-59 | 55 |
int1 | YP_005160012.1 | integrase | Not tested | Not named | Protein | 3e-64 | 55 |
intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 1e-76 | 55 |
intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 5e-77 | 55 |
intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-76 | 55 |
EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 2e-76 | 55 |
intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 5e-77 | 55 |
intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 7e-77 | 55 |
intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 5e-77 | 55 |
intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 7e-77 | 55 |
intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 7e-77 | 55 |
intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 5e-77 | 55 |
intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 7e-77 | 55 |
intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 4e-76 | 54 |
unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 2e-76 | 54 |
intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 4e-76 | 54 |
intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 4e-76 | 54 |
intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 4e-76 | 54 |
intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 4e-76 | 54 |
intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 4e-76 | 54 |
intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-76 | 54 |
intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 4e-76 | 54 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Nhal_1283 | YP_003526824.1 | integron integrase | VFG1028 | Protein | 1e-76 | 54 |