Gene Information

Name : Nhal_1202 (Nhal_1202)
Accession : YP_003526751.1
Strain : Nitrosococcus halophilus Nc 4
Genome accession: NC_013960
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1197446 - 1198141 bp
Length : 696 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: noc:Noc_2214 ABC transporter ATPase

DNA sequence :
ATGAAAAACATGGTCGAAGTAAACAACGTCAGCAAATCCTACCAGCGGGGCAGTCAGATTATTCCCGTACTGGATGACAT
TAGCCTGATCATAGCGGAAGGTGAATTTATCGCCCTCATGGGGCCTTCCGGCTCGGGGAAAAGCACCCTGCTTAATTTAA
TTGCGGGTATTGACACCCCCGACCAGGGCAGACTGTTAGTCAACGACATTGACATCACCACCCTATCTGAGCGCTCGCTC
GCCCAATGGCGAGCCGAGAATGTGGGATTTATTTTTCAATTTTACAATTTGATGCCCGTTCTGACCGCCTTTGAGAATGT
AGAACTGCCATTGCTATTGACGGATTTATCTCGAAAAGAGCGGCGGGAACATGTGGAACTGGTGCTGGCCATTGTGGGTC
TTCAAGATCGAATGGATCATTACCCTTCGCAGCTTTCCGGCGGTCAACAACAACGGGTGGCTATCGCCCGCGCGGTAGTC
ACCGATCCGACCATCATCGTCGCTGATGAGCCCACCGGGGATCTGGACCGTGTCGCTGCCCGAGAGGTGCTAAACCTTCT
CCAACGGCTAAACCGAGAACTCCATAAAACCGTGATCATGGTCACCCATGACCAATTGGCCGCTGAGCGTGCCCATGTGA
TTAGGCATCTGGATAAGGGCGTATTGAATAATCAACCCCCTCCTGTCCCCTCCTGA

Protein sequence :
MKNMVEVNNVSKSYQRGSQIIPVLDDISLIIAEGEFIALMGPSGSGKSTLLNLIAGIDTPDQGRLLVNDIDITTLSERSL
AQWRAENVGFIFQFYNLMPVLTAFENVELPLLLTDLSRKERREHVELVLAIVGLQDRMDHYPSQLSGGQQQRVAIARAVV
TDPTIIVADEPTGDLDRVAAREVLNLLQRLNRELHKTVIMVTHDQLAAERAHVIRHLDKGVLNNQPPPVPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-33 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_1202 YP_003526751.1 ABC transporter NC_012469.1.7686878. Protein 3e-45 47
Nhal_1202 YP_003526751.1 ABC transporter NC_008702.1.4606598. Protein 1e-38 46
Nhal_1202 YP_003526751.1 ABC transporter CP001581.1.gene798.p Protein 8e-44 43
Nhal_1202 YP_003526751.1 ABC transporter NC_012469.1.7685735. Protein 4e-38 41