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Name : Nhal_1170 (Nhal_1170) Accession : YP_003526720.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Unknown Product : NERD domain-containing protein Function : - COG functional category : R : General function prediction only COG ID : COG3972 EC number : - Position : 1159468 - 1161330 bp Length : 1863 bp Strand : + Note : PFAM: NERD domain protein; KEGG: tgr:Tgr7_1772 DNA helicase II DNA sequence : ATGGCGACTTTGATTCCTTCACTCAATAGTTGTCTCGGTCGTATGCAGGCTGGCGAAAAGCGTTTTGCATACCGATTGGA GAGTCACCTGGAGGACGACTATCTTTGTTGGTACGAGATGCCGGTGGGGCGGCGCCAACGTTACTCGGATTTCATCATTC TTCATCCCCTGCGTGGCTTGTTATTGTTGGAGGTGAAGGATTGGAAGCGCGATACCATTCAGAAGATCGACAAGGCCACA GCCACAATCATTACGCCTAGTGGTCTCAAGATAGTTAGCAATCCATTGGAACAAGTCCGCCAGTGTACCTATCAGCTGAT CGAGCATTTGGAAAAAGATCCCCAGTTGATCAATCAGTCGGGCCGATATAAGGGCCATCTGGTGTTTCCCTATGGCTATG GGGTGGTCCTGAGCAATATTACCCGCAAGCAATTTGATGCCACCGATTTGGGTGAAGTGCTGCCGGAATATCAGACCCTC TGCAAGGATGAGATGGTGGGGAGCGTTGATCCTGAAGACTTTCAGGAACGCCTCTGGAACATGTTCAAGGTGCAGTTCTC CCAGCCGCTGACCTTACCCCAGATCGACCGGATTCGCTGGCATCTATTTCCCGAGGTGCGTATCAATGCTGGCGACCAGG GAAGTCTCTTTCCTGCCGAATCAGAAGAGGAGAAGGTGGAAGCCCTCTTGCCCGACATTGTCAAAGTAATGGATATGCAG CAAGAGCTGTTGGCTCGCAGCATGGGGGAGGGGCATCGGGTGATCCATGGGGTGGCCGGGTCGGGTAAGACCTTAATCCT GGGCTATCGTTGCCTCTACCTGGCTAAGCTGTTGCACCAGCCGATTTTAGTGCTCTGCTATAACATCACCCTAGCCGCCA GGTTGCGGGAACTGATGGCGGAGCGGGGTATCGGCGACAAGGTCAATGTCTACCATTTTCATGACTGGTGTGGTGAACAG TTGCGCACCTATCACGTTGACTGCCCCAAGCCCGGAGAAGGCTATTGTGAGCGGCTGGTGGAGAAAGTCATTGCTGCGGT TGAGAAGGGGACAATACCGAAGGCTCAGTACGGCGCGGTCATGATTGATGAAGGTCATGACTTCGAACCGGAATGGTTGA CCCTAGTGGTTAGCATGGTTGATCCAGAAACCGATTCTTTATTGCTGCTCTATGACGATGCCCAATCCATCTACAGCAAG AAGAGGCAACTCGGTTTCAGTCTGTCCAGTGTGGGTATTCGGGCCCAGGGCCGAACCACCGTCCTAAAACTGAACTATCG AAATACCGACGAGATTCTCGGTTTCGCCTATCGCTTTGCTAGCCGTTATCTCAGCCCTAGTGACAAGGGTGAGGATCATG TCCCCTTGGTGGAGCCCCAATCGGCGGAGCGACATGGGCCGCCTCCTGCCGTCAGGACTTTTGAGAGTTACGAGCAGGAA GCTCGCTATATTGCCCGAATCTTTCATCGGCTGCACGAGGAGCAGGATATTCCTTGGTCAGAGATGTGCGTCACTTATCG CAGCAATTGGATGGGAGAGAAACTGCGCAGATTCTTTTTGGCCGAGGGGGTGCCTTGTCACTGGCTGGGAAATGCAAAGG CAAAGAAGCAGTTCAAGGCTTCCCATGACAGCGTCAAGCTGATGACGATGCATAGCAGCAAAGGCCTGGAGTTTCCGGTG GTAGCCGTTTCCGGTGTTGGCTATATGGCGGCAGAGGGGGAAGATCTGGTCCCAGAGGCCAAACTGCTTTATGTGGCTAT GACTCGCTCAACGGAGAAGCTCCTGATCACCAGCCACCGGGAGACAGCCTTTCTCGCCCAACTTCAGGATGCAGGCTCGC CCCTGGAAGGTATAAGTTATTAG Protein sequence : MATLIPSLNSCLGRMQAGEKRFAYRLESHLEDDYLCWYEMPVGRRQRYSDFIILHPLRGLLLLEVKDWKRDTIQKIDKAT ATIITPSGLKIVSNPLEQVRQCTYQLIEHLEKDPQLINQSGRYKGHLVFPYGYGVVLSNITRKQFDATDLGEVLPEYQTL CKDEMVGSVDPEDFQERLWNMFKVQFSQPLTLPQIDRIRWHLFPEVRINAGDQGSLFPAESEEEKVEALLPDIVKVMDMQ QELLARSMGEGHRVIHGVAGSGKTLILGYRCLYLAKLLHQPILVLCYNITLAARLRELMAERGIGDKVNVYHFHDWCGEQ LRTYHVDCPKPGEGYCERLVEKVIAAVEKGTIPKAQYGAVMIDEGHDFEPEWLTLVVSMVDPETDSLLLLYDDAQSIYSK KRQLGFSLSSVGIRAQGRTTVLKLNYRNTDEILGFAYRFASRYLSPSDKGEDHVPLVEPQSAERHGPPPAVRTFESYEQE ARYIARIFHRLHEEQDIPWSEMCVTYRSNWMGEKLRRFFLAEGVPCHWLGNAKAKKQFKASHDSVKLMTMHSSKGLEFPV VAVSGVGYMAAEGEDLVPEAKLLYVAMTRSTEKLLITSHRETAFLAQLQDAGSPLEGISY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 1e-108 | 42 |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 6e-108 | 42 |
