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Name : Nhal_1115 (Nhal_1115) Accession : YP_003526673.1 Strain : Nitrosococcus halophilus Nc 4 Genome accession: NC_013960 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1111207 - 1113789 bp Length : 2583 bp Strand : - Note : KEGG: noc:Noc_0919 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; MutS III domain protein; SMART: DNA mismatch repair protein M DNA sequence : ATGTCAGCGAATGGCCTGCAAAAACCCCATACTCCCATGATGCAACAGTACCTGCGGATTAAGGCAGACTATCCCCACAC CCTTCTACTTTACCGTATGGGTGACTTCTATGAGCTGTTCTATGAGGACGCTCGACGTGCGGCAGAACTACTGGATATTG CCCTCACTAGCCGTGGCCAGTCAGCGGGCGCCCCCATTCCCATGGCGGGAATCCCCTACCATGCCCTCGATTCCTATTTG GTAAAACTAGTCCGTCAGGGAGAGTCAGTGGCCATCTGTGAGCAGATAGGTGACCCCGCCAAAAGCAAAGGTCCTATAGA ACGCCAGGTAGTGCGGGTGGTTACCCCGGGAACAGTAACCGATGAAGTCCTGTTGGAGGCCCGCCAGGATAATTTGCTTG CCGCTCTCCAGCGGCAAGGAGAGGTTTTTGGATTTGCCGTGCTTGATCTTTGTAGCGGGCGTTTTAGCATTCTAGAAGTG GATAACGAAGCAGCAGCCGCCAGCGAACTGGCCCGCATCCGTCCGGCGGAACTTTTGGTCAGCGAGGAGCTAACGCTCAC CCTGGCCGATCCTCAAGCAGCTCCGGTGGCACGGCCTTTACCTCCCTGGTATTTTGATACGGAGAGCGCCCAACGCCAAC TTTGCCAGCAATTCGGGACCCAGGATCTAGCCGGCTTTGGCTGCGAGGACCTAAAAACCGCTATCGCCGCTGCAGGATGC CTGCTGCAATATCTCCACGATACCCAGCGGACTCGGCTTCCCCATATCCAAAAACTCCAGGTAGAGTCCCAGGAAACTAG CGTTATCCTTGATCCCAGCACGCGGCGCAACCTGGAATTAGAAGAAAGCTTGAGTGGTCATTCCAGCCATACCCTGATTG CAGTGCTGGACCGAACGGCAACCGCTATGGGCAGCCGCCTGCTACGGCGCTATCTCCATCGGCCCCTGCGGGACCAAACT CTACTCAAGCAGCGTCAACAGGCGATCGCCACCCTCCTGGAAACAGGATTGAGTGCTGCTCTACAAAAGCTACTTCGGGG AATTGGCGATATTGAGCGAATTCTCTCCCGGGTAGCCTTGCGTTCAGCCCGCCCACGAGATCTTGTTCAATTACGCCAGT CTCTGGGATTATTACCTGAAATTCAAGCCCCCCTATTCCCCCTCGATAGTCCCCAGCTTCAGTTACTGCGGCAGGATCTA GGCCCCTTTCCAGAACTCTATCAGCTGCTGCAACGAGCCATCTGCGAAAATCCTCCGGTACTCATCCAAGAGGGAGGAGT GATTGCCCCCGGCTTCGACTCTAAACTGGATGAGTTGCGGCATCTGAGTGACAACGCCGGGCAGTTTTTAGTGGAACTGG AGCAACGGGAACGGGAGCGCACAGGACTGTCGACCCTTAAGGTAGGCTATAATAAGATCCATGGCTACTATATTGAGATC CCTCGCACTCAAGCCCATAAAGCCCCTCCTGACTATACTCGCCGCCAGACCTTAAAGGGGGCTGAACGCTATATCACCCC GGAACTGAAAGGCTTTGAGGATAAGGTGTTAAGTGCCCGAGAACGGGCGCTGGCGCGGGAAAAAGCCCTTTATGAAGAAT TGCTTGAGCAATTGGCCAATCCGCTCCCGGCTTTACAGGTTTGTGCCAGTGCCTTGGCGGAATTGGATGTGCTGAATAAC CTGGCTGAACGGGCCGAAACCCTGGAATATGTGGCCCCCGTGTTGAGCGATCAGCCGGGGATCCGGATCGAAGGGGGCCG CCACCCAGTGGTAGAGCAAACTATGGAGGCCCCTTTTGTGCCCAATGATCTAACCCTCCATGAAGAACGACAGATGTTAA TCATTACTGGTCCTAATATGGGGGGAAAATCCACTTACATGCGCCAAACGGCCTTAATTGTCCTACTCGCCCATATTGGC AGCTTTGTTCCAGCCCGCTGCGCGGTGATTGGCCCTATTGACCGAATGTTCACCCGCATCGGCGCCGCCGATGATCTTGC CGGGGGACGCTCCACTTTTATGGTGGAAATGACTGAGACCGCCAACATTCTACATAATGCCACCGAGCACAGCTTAGTGC TGATGGATGAAATAGGCCGGGGCACAAGCACTTTCGACGGTCTATCCCTGGCCTGGGCCGTGGCTTCCCACCTTGCCTGC ACGGTGCATTCCCTGACTCTATTTGCAACCCATTATTTTGAACTGACTAGCCTCCCTGAGCATTTTCCTGGGGTGGCTAA CCTTCATCTCACAGCAACTGAGCATAAGGAACGTATTGTTTTTCTCCATGCAGTGAAAGAGGGTCCTGCCAACCAAAGCT ATGGCCTCCAAGTGGCCGCATTGGCTGGCGTTCCCCAGGAAGTCATTGCCCAAGCGCAGCAACGGCTCGTGGAATTAGAG AATCACGCCCGGCAAAAGCCGGCCGATGGGGGCGAAGCCCAACTCGACCTATTTGCAACACCTGCGGATCATCCTGTTGT TCAGATCTTACAGGATTTGGACCCAGACGAGCTCAGTCCCCGGCAAGCCTTAAAGAAACTCTATGAACTCAAAGCGCTGT TAAACCTTGCTGTTAGCAACTAA Protein sequence : MSANGLQKPHTPMMQQYLRIKADYPHTLLLYRMGDFYELFYEDARRAAELLDIALTSRGQSAGAPIPMAGIPYHALDSYL VKLVRQGESVAICEQIGDPAKSKGPIERQVVRVVTPGTVTDEVLLEARQDNLLAALQRQGEVFGFAVLDLCSGRFSILEV DNEAAAASELARIRPAELLVSEELTLTLADPQAAPVARPLPPWYFDTESAQRQLCQQFGTQDLAGFGCEDLKTAIAAAGC LLQYLHDTQRTRLPHIQKLQVESQETSVILDPSTRRNLELEESLSGHSSHTLIAVLDRTATAMGSRLLRRYLHRPLRDQT LLKQRQQAIATLLETGLSAALQKLLRGIGDIERILSRVALRSARPRDLVQLRQSLGLLPEIQAPLFPLDSPQLQLLRQDL GPFPELYQLLQRAICENPPVLIQEGGVIAPGFDSKLDELRHLSDNAGQFLVELEQRERERTGLSTLKVGYNKIHGYYIEI PRTQAHKAPPDYTRRQTLKGAERYITPELKGFEDKVLSARERALAREKALYEELLEQLANPLPALQVCASALAELDVLNN LAERAETLEYVAPVLSDQPGIRIEGGRHPVVEQTMEAPFVPNDLTLHEERQMLIITGPNMGGKSTYMRQTALIVLLAHIG SFVPARCAVIGPIDRMFTRIGAADDLAGGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTFDGLSLAWAVASHLAC TVHSLTLFATHYFELTSLPEHFPGVANLHLTATEHKERIVFLHAVKEGPANQSYGLQVAALAGVPQEVIAQAQQRLVELE NHARQKPADGGEAQLDLFATPADHPVVQILQDLDPDELSPRQALKKLYELKALLNLAVSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nhal_1115 | YP_003526673.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 61 |
