Gene Information

Name : Slit_0496 (Slit_0496)
Accession : YP_003523123.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 502897 - 503337 bp
Length : 441 bp
Strand : -
Note : KEGG: rpf:Rpic12D_3044 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGAAAACTCGTTTCTCAACCCGCCTTGCGCAAGGCTTCACCCTGATCGAGATCATGGTCGTCGTCCTCATCATCGGCGT
GCTGGCAGCGCTGATCGTACCCAAGGTGATGAGCCGTCCGGACGAGGCGCGCATCACCGCCGCCAAGCAGGACATCGCCA
CCATCACCCAGGCGCTCAACCTCTACAAACTCGACAACCAGCGCTATCCCACCACGGAACAGGGGCTGACCGCCCTGGTG
AAGAAACCCACCATCTCGCCCATTCCGGCCAACTGGAAAAGCGAAGGCTACCTCGACCGCGTACCGAAAGATCCGTGGGG
CACACCTTACCAGTACCTGCAGCCGGGCGTGCACGGCGCGATCGACGTGTTCAGCCTGGGTGCGGACAAGACCAGCGGCG
GTGAAGGCAACGACGCCGACATCGGATCGTGGCAGGACTGA

Protein sequence : 
MKTRFSTRLAQGFTLIEIMVVVLIIGVLAALIVPKVMSRPDEARITAAKQDIATITQALNLYKLDNQRYPTTEQGLTALV
KKPTISPIPANWKSEGYLDRVPKDPWGTPYQYLQPGVHGAIDVFSLGADKTSGGEGNDADIGSWQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 4e-24 49
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-24 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_0496 YP_003523123.1 general secretion pathway protein G VFG0180 Protein 2e-32 62
Slit_0496 YP_003523123.1 general secretion pathway protein G VFG1871 Protein 1e-30 60
Slit_0496 YP_003523123.1 general secretion pathway protein G VFG2050 Protein 1e-24 49