Gene Information

Name : Slit_2915 (Slit_2915)
Accession : YP_003525527.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2930756 - 2932627 bp
Length : 1872 bp
Strand : +
Note : KEGG: mms:mma_0384 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAACGCCAATCCCCAATTCCTGGCTGCTGCTGCACATGTCGACGAAGCGGCAGTCAAACCCTTGCCGAATTCGCGCAA
GATCTATGTCGAAGGCAGCAGGCCTGACATCCGCGTGCCGATGCGCGAGATCACGCTGACCGATACCCACCTGAACAACG
GCGTCGAGAAGAACCCACCGATCTACGTCTACGACTGCTCCGGCCCTTATACCGACCCCGCCGTCAAGATCGACATCCGT
TCCGGCCTGGACGAGATGCGCGCGCCGTGGATCGCCGAGCGCAACGACACCGAGCCGTTGCCGCGCCTGACCTCCGAATA
CGGCCAGCAGCGTCTGAACGACCCGACACTGGCCGACATGCGCTTCAACCTCAAGCACACGCCGCGCAAGGCCAAGCCCG
GCAAGAACGTGACGCAGATGCACTATGCCCGCCAAGGCATCATCACGCCGGAGATGGAATACATCGCCATCCGCGAGAAC
CAGAGGATCGACGGACTTTCCGAAATGTTGCTGACCCAGCACAAGGGCGAGAACTTCGGCAAAGCCATGCCGAAGAAGAT
CACGCCGGAATTCGTGCGCGACGAAGTCGCTGCCGGACGCGCCGTGATCACCACCAACATCAACCACCCCGAAGTCGAAC
CGATGATCATCGGGCGCAACTTCCTGGTAAAGATCAACGCCAACATCGGCAACTCCGCGCTCGGTTCCAGTATCCAGGAA
GAAGTCGAGAAGATGACCTGGGCCATCCGCTGGGGTGGCGACACGGTGATGGATCTCTCCACCGGCAAGAACATCCACGA
GACGCGCGAATGGATCATCCGCAATTCGCCCGTGCCCATCGGCACCGTGCCCATCTACCAGGCGTTGGAGAAAGTGAACG
GTAAGGCCGAAGACCTGACCTGGGAGATATTCAAGGACACCTTGATCGAGCAGGCCGAACAAGGCGTGGACTACTTCACC
ATCCACGCCGGTGTACTGCTGCGCTACATCCCGATGACCGCAAACCGCATGACCGGCATCGTATCGCGCGGCGGTTCTAT
CATGGCCAAGTGGTGTCTGGCACACCACAAGGAGAATTTCCTCTATACGCATTTCGAGGATATCTGCGAGATCATGAAGA
CCTACGACGTGACCTTCAGCCTAGGCGATGGATTGCGCCCCGGCTCGATCTACGACGCCAACGACGAGGCGCAACTAGGC
GAACTGAAGACGCTGGGCGAGCTGACGCAGATCGCGTGGAAACACGACGTGCAGGTGATGATCGAAGGCCCCGGCCATGT
GCCCATGCACATGATCAAGGAGAACATGGACCTGCAACTGAAGTGGTGCCACGAAGCGCCGTTCTACACGCTGGGCCCGC
TGACGCAGGACATCGCCCCCGGCTACGATCACATCACCAGCGCCATCGGTGCTGCGATGATCGGCTGGTTCGGCACCGCC
ATGCTGTGCTACGTCACGCCCAAGGAACACCTCGGCCTGCCCAACAAGGCCGACGTGAAGGAAGGCATCATCACCTACAA
GATCGCCGCCCACGCCGCCGACCTCGCCAAGGGCCACCCCGGCGCGCAGATCCGCGACAACGCCATGAGCAAGGCGCGCT
TCGAATTCCGCTGGGAGGACCAGTTCAACATCGGCCTCGACCCCGACCGCGCGCGCGAGTACCACGACGAAACTCTGCCC
AAAGAATCGGCCAAGGTCGCGCACTTCTGCTCCATGTGCGGCCCGCATTTCTGCTCAATGAAGATATCGCAGGATGTGCG
CGACTTCGCAGCGAAGGAAGGCCTTTCCGAGCAGGAAGCGCTTAAGAAGGGGATGGAAGTGAAGTCGGTGGAGTTTGTGA
AGCAGGGGGCAGAGGTTTATCACAAGGCTTGA

Protein sequence :
MNANPQFLAAAAHVDEAAVKPLPNSRKIYVEGSRPDIRVPMREITLTDTHLNNGVEKNPPIYVYDCSGPYTDPAVKIDIR
SGLDEMRAPWIAERNDTEPLPRLTSEYGQQRLNDPTLADMRFNLKHTPRKAKPGKNVTQMHYARQGIITPEMEYIAIREN
QRIDGLSEMLLTQHKGENFGKAMPKKITPEFVRDEVAAGRAVITTNINHPEVEPMIIGRNFLVKINANIGNSALGSSIQE
EVEKMTWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFKDTLIEQAEQGVDYFT
IHAGVLLRYIPMTANRMTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKTYDVTFSLGDGLRPGSIYDANDEAQLG
ELKTLGELTQIAWKHDVQVMIEGPGHVPMHMIKENMDLQLKWCHEAPFYTLGPLTQDIAPGYDHITSAIGAAMIGWFGTA
MLCYVTPKEHLGLPNKADVKEGIITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNIGLDPDRAREYHDETLP
KESAKVAHFCSMCGPHFCSMKISQDVRDFAAKEGLSEQEALKKGMEVKSVEFVKQGAEVYHKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 77
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 77
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72