Gene Information

Name : Slit_2862 (Slit_2862)
Accession : YP_003525474.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Virulence
Product : Redoxin domain protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2878412 - 2878957 bp
Length : 546 bp
Strand : +
Note : PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_3430 redoxin domain protein

DNA sequence : 
ATGACCAAAGATACAGCCAAAAAACCTGCCACCACACTCGGTGGTGCACCCGTCACCCTGTTCGGCACATTTCCCGGCGC
GGGCCAACAGGCCCCGGATTTCACGCTGGTGGACAAGGATCTGAAGGACGTTTCGCTGCAGAACTTCGCCGGCAAGCGCA
AGGTGCTCAACATCGTGCCCAGCCTCGACACTGCCGTATGCGCCACTTCGACGCGCAAGTTCAACGAAGCTGCCGGCAAA
CTGAACAACACAGTGGTGCTGGTGATCTCCGCCGACCTGCCCTTCGCGATGAACCGCTTCTGCGTGGCGGAAGGCTTGCA
GAATGTCGTCACGCTGTCGCTGATGCGCGGCCGCGATTTCATGCGCAACTACGGCGTGAAGATCGCCGACACCGCATTGG
CCGGTTTGACTGCGCGGGCCGTGCTGGTGCTGGATGACAAGGACAAGATCATCCATGCCGAGCTGGTGGACGACATCAAA
CACGAACCGAACTACGACGCGGCACTGGCCGCGCTCGACAAGAGCGAGCAAGTGGCAGCCCCTTGA

Protein sequence : 
MTKDTAKKPATTLGGAPVTLFGTFPGAGQQAPDFTLVDKDLKDVSLQNFAGKRKVLNIVPSLDTAVCATSTRKFNEAAGK
LNNTVVLVISADLPFAMNRFCVAEGLQNVVTLSLMRGRDFMRNYGVKIADTALAGLTARAVLVLDDKDKIIHAELVDDIK
HEPNYDAALAALDKSEQVAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 3e-32 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 2e-32 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-32 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_2862 YP_003525474.1 Redoxin domain protein VFG0087 Protein 1e-32 45