Gene Information

Name : Slit_0267 (Slit_0267)
Accession : YP_003522896.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 271698 - 272642 bp
Length : 945 bp
Strand : +
Note : TIGRFAM: porphobilinogen deaminase; KEGG: mei:Msip34_0034 porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence : 
ATGAGTCAGGCTTCACTTATTCCCCCAGCCCGTCTGGTGATCGCTTCGCGCGAAAGCGCATTGGCCATGTGGCAAGCAGA
ACATATCAGAGACAGGCTGCGCGCATTATACCCGCAAACTTCCGTCAGCATATTGGGCATGACCACCCAGGGTGACCAGA
TTCTGGATGTGACCCTGTCCAAGATCGGTGGCAAAGGCCTGTTCGTGAAAGAGCTGGAAACCGCGCTGGAAAATGGGAGC
GCCGATATCGCCGTGCATTCACTGAAAGACGTCCCGATGAATCTGCCGGAAGGCTTTGCCCTGGCCTGCATCGGCGAGCG
CGAGGATCCGCGCGATGCCTTCGTTTCCAACAGATTCGATAATCTGGCCGCTTTGCCCGCAGGCAGCGTGGTCGGAACCT
CCAGTCTGCGCCGTGAAAGCCAGTTGCGCGCGCGTTTCCCGCACCTGAAGATCGAGCCGCTGCGCGGCAATGTGCAGACG
CGGCTGCGCAAGCTGGACGAAGGGCAGTATGCAGCCATCATCCTGGCGGCGGCAGGCTTGAAGCGCCTTGGGTTGGGCGA
GCGCATCCGCGCCGTCATTTCCTCGGACGAAAGCTTGCCTGCGGTAGGACAGGGTGCTCTGGGCATCGAGACGCGCGCCG
ACCGGCCCGACCTGAAAGCGGTACTTGCTCCGTTGCACCATGCAGATACAGCCGCCTGTGTGCTGGCGGAGCGTGCGATG
AGCCGGGCGCTGGCTGGCAGCTGCCAGGTCCCTCTGGGCGGTTTCGCGGAAGTGCAGAACGGCAAACTGCGCATGCGCGG
TTTCGTCGCAACGCCCGACGGAACGCGCTTGCTACGTGCCGAACATGTTGGCGACATCGCACAACCGGAAGCGTTGGGCG
ACCTGGTCGCGCAGGATCTGCTCAGGCAGGGCGCGGGCGAGATACTCGCGGCGCTGAATGGCTGA

Protein sequence : 
MSQASLIPPARLVIASRESALAMWQAEHIRDRLRALYPQTSVSILGMTTQGDQILDVTLSKIGGKGLFVKELETALENGS
ADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGSVVGTSSLRRESQLRARFPHLKIEPLRGNVQT
RLRKLDEGQYAAIILAAAGLKRLGLGERIRAVISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAM
SRALAGSCQVPLGGFAEVQNGKLRMRGFVATPDGTRLLRAEHVGDIAQPEALGDLVAQDLLRQGAGEILAALNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-72 60
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-72 60