Gene Information

Name : Slit_0258 (Slit_0258)
Accession : YP_003522887.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 258297 - 259682 bp
Length : 1386 bp
Strand : -
Note : KEGG: mei:Msip34_0037 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
ATGGCAACGATGCAAGACAAACAGGCATGGTCGGGACGTTTCAATGAACCCGTGGCGGAGTTGGTGAAGCGCTATACCGC
TTCGGTGGATTTCGACCAGCGCCTGGCACTGTTCGATATCCGCGGGTCATTGGCGCATGCGCAGATGCTCGCTGCCTGCA
GCATCATCAGCGTGCAGGACCTGAACGACATCCAGCGCGGCCTGGCGCAGATCGAGAAAGAGATCGCCGACGGCGACTTC
GTCTGGCAACTCGACCTGGAAGATGTGCACCTGAACATCGAGAAACGGCTTACCGCGCTGGTGGGCGATGCCGGCAAGCG
CCTGCATACGGGACGCTCGCGCAACGACCAGGTGGCGACCGACATCCGCCTGTATCTGCGCAGCGCCATCGACGACATCA
TTGCACTGCTGAAGAACCTGCAAAAAGCCCTGCTCGATCTGGCACAACATCACACGCACACCATCATGCCGGGCTTCACC
CATCTGCAGGTGGCGCAACCGGTCAGCTTCGCCCATCACCTGATGGCCTATTTCGAGATGTGCCAGCGCGACGTGGAGCG
ATTCGGCGATGCGCGCCGCCGCGTCAATCGCTTGCCGCTCGGGTCCGCCGCGCTGGCTGGAACCAGTTATCCGATCAAGC
GCGAGATGGTGGCCGAACTGCTGGGCTTCGAGTCGGTGTGCCAGAACTCGCTGGATGCGGTGTCCGACCGCGATTTCGCC
ATCGAATTCACCGCCGCCGCCGCCCTGACCATGACGCACCTGTCTCGTTTGTCGGAAGAGCTGATCCTGTGGATGAGCCC
GCGTTTCGGCTTCATCGATATCGCCGACCGCTTCTGTACCGGGTCTTCGATCATGCCGCAGAAGAAGAATCCCGATGTGC
CCGAACTGGTGCGCGGCAAGACCGGACGCGTGAACGGCCATCTGGTCGCGCTGCTCACCCTGATGAAAGGCCAGCCGCTG
GCCTACAACAAGGACAATCAGGAAGACAAGGAGCCGCTGTTCGATACAGTGGATACGCTCACCCAGACTTTGCGCATCTA
TGCCGACATGATGAGCGGCATCACGGTCAAGCAGGAGGCCATGCGCAGTGCTGCTTTGCAGGGCTACGCCACGGCAACCG
ACCTGGCCGATTATCTGGTGAAGAAGGGTTTGCCGTTCCGCGATGCGCACGAGGCGGTAGCTTTGGCCGTGCGCCATGCC
GAGCAGAAAGGCCGCGACCTGGCCGAACTCAAGCTGGACGAGCTGCAACAGTTCTCGAACCTGATCGCGGACGACATCTA
TGGCGTGCTGACACTGGAAGGATCGCTCGCGGCGCGCAACCACACGGGCGGTACCGCCCCGCAGCAGGTGGAAGCGGCCA
TAGCGCGTGCGCGCAAACTGCTCTGA

Protein sequence :
MATMQDKQAWSGRFNEPVAELVKRYTASVDFDQRLALFDIRGSLAHAQMLAACSIISVQDLNDIQRGLAQIEKEIADGDF
VWQLDLEDVHLNIEKRLTALVGDAGKRLHTGRSRNDQVATDIRLYLRSAIDDIIALLKNLQKALLDLAQHHTHTIMPGFT
HLQVAQPVSFAHHLMAYFEMCQRDVERFGDARRRVNRLPLGSAALAGTSYPIKREMVAELLGFESVCQNSLDAVSDRDFA
IEFTAAAALTMTHLSRLSEELILWMSPRFGFIDIADRFCTGSSIMPQKKNPDVPELVRGKTGRVNGHLVALLTLMKGQPL
AYNKDNQEDKEPLFDTVDTLTQTLRIYADMMSGITVKQEAMRSAALQGYATATDLADYLVKKGLPFRDAHEAVALAVRHA
EQKGRDLAELKLDELQQFSNLIADDIYGVLTLEGSLAARNHTGGTAPQQVEAAIARARKLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 2e-139 65
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 2e-139 65