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Name : Slit_2541 (Slit_2541) Accession : YP_003525153.1 Strain : Sideroxydans lithotrophicus ES-1 Genome accession: NC_013959 Putative virulence/resistance : Unknown Product : Lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2576206 - 2578452 bp Length : 2247 bp Strand : - Note : KEGG: mms:mma_1191 arginine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : ATGAAATTCAATTTCCCAATCATCATCATCGACGAGGATTTTCGCTCGGAGAACGCCAGCGGCCACGGTATCCGCGCGCT TGCCCAGGCCATCGAGAAAGAGGGCATCGAAGTCGTCGGCATGACCAGCTACGGCGACCTGACCTCGTTTGCGCAGCAGC AGAGCCGCGCATCGGCTTTCGTGCTGTCCATCGACGATGAGGAGTTCGGTGGCGGCAGTGTGGAAGAGACGGAAGTCGCC TTGCGCACCTTGCGCGCATTCGTCGAAGAGATCCGCTTCAAGAACGCCGACATCCCGATCTACTTGTACGGCGAGACGCG CACTTCGCGCCACATCCCGAACGACATTCTGCGCGAGCTGCACGGTTTCATCCACATGCACGAGGACACGCCGGAATTCG TGGCACGCCACATGATCCGCGAAGCGAAGTCCTACATGGATTCGCTGGCGCCGCCGTTCTTCCGCGCGTTGGTGGATTAC GCGCAAGACGGTTCGTATTCCTGGCACTGTCCCGGTCACTCCGGCGGCGTGGCGTTCCTGAAGTCGCCGGTGGGGCGCAT GTTCCACCAGTTCTTCGGCGAGAACATGCTGCGCGCCGACGTGTGCAACGCGGTGGACGAACTGGGACAACTGCTGGACC ACACCGGCCCGGTGGCAGCGTCCGAGCGCAATGCGGCGCGCATTTTCAATGCAGACCATTTGTTCTTCGTTACCAACGGC ACTTCGACCTCCAACAAGATCGTGTGGCACTCGATGGTGGCGCCGGACGATATCGTGGTGGTGGACCGCAACTGTCACAA GTCCATCCTGCACGCGATCATGATGACCGGTGCGGTGCCGGTGTTCCTGACGCCGACGCGCAACAACTTCGGCATCATCG GCCCGATCCCGAAATCGGAATTCGAGATGGCGAACATCCAGAAGAAGATCGATGCCAACCCGTTCATCAAGGACAAGAAG AAAAAGCCGCGCATCCTCACCATCACGCAGAGCACTTACGACGGGGTGCTGTACAACGTTGAAACGCTCAAGGAGATGCT GGATGGCAGGATCGATGCATTGCATTTCGACGAAGCCTGGCTGCCGCATGCGGCGTTCCATGACTTCTACAAAGACATGC ACGCCATCGGCCGCGACCGTCCGCGCGCGAAAGAATCCATGGTGTTTTCCACGCAGTCCACGCACAAGCTGCTGGCGGGC CTGTCTCAGGCCTCGCAGATACTGGTGCGCGACAGCGAGTCGCGCAAGCTGGACCGCGACTGTTTCAACGAAGCCTACCT GATGCACACCTCGACCTCGCCGCAATACGCCATCATTGCCTCGTGCGACGTGGCGGCGGCGATGATGGAGCCGCCCGGCG GCACCGCGCTGGTGGAAGAGTCCATCGCCGAAGCGCTCGATTTCCGCCGCGCCATGCGCAAGGTGGACGCCGAATTCGGC ACGGACTGGTGGTTCAAGATGTGGGGGCCGGACTATCTGTCGGAAGAGGGCATGGCCGAGCGCGAGGACTGGGTGTTGCG CGCCGACGATCGCTGGCATGGCTTCGGCAAGCTGGCCGAGGGTTTCAACATGCTCGACCCGATCAAGGCCACCGTGGTCA CACCGGGACTGGATGTCGATGGCGATTTTGCCGACAGCGGCATCCCGGCCAGCATCGTCACCAAGTACCTTGCCGAACAC GGTGTGGTGGTGGAGAAGTGCGGCCTGTATTCCTTCTTCATCATGTTCACCATCGGCATCACCAAGGGGCGCTGGAACAG CATGGTGACCGAGCTGCAGCAGTTCAAGGACGACTACGACAAGAACCAGCCGCTGTGGCGTGTGCTGCCGGAATTCATCG CCAAGAACCCGCGCTATGAAAAGATCGGACTGCGCGACCTGTGCGACCAGATCCACGGCATCTACAAGGCCAACGACGTG GCGCGCCTGACCACGGAAATGTACCTGTCCAGCATGGTGCCTGCCATGAAGCCGTCCGACGCCTTCGCCAAGATGGCGCA TGGCGAGATCGAGCGTGTGTCCATCGATGACCTGGAAGGTCGCGTCACCGCCGTGTTGTTGACGCCTTATCCGCCGGGCA TCCCGCTGCTGATCCCGGGTGAACGTTTCAACAAGACCATCGTCGATTACCTCAAGTTCGCGCGCGAGTTCAACAAGAAA TTCCCCGGTTTCGAGACCGACATCCACGGTCTGGTGGCGGAGAAGTCCAACGGCGAACGCGTGTACTACGTGGACTGCGT GAAGTAG Protein sequence : MKFNFPIIIIDEDFRSENASGHGIRALAQAIEKEGIEVVGMTSYGDLTSFAQQQSRASAFVLSIDDEEFGGGSVEETEVA LRTLRAFVEEIRFKNADIPIYLYGETRTSRHIPNDILRELHGFIHMHEDTPEFVARHMIREAKSYMDSLAPPFFRALVDY AQDGSYSWHCPGHSGGVAFLKSPVGRMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNADHLFFVTNG TSTSNKIVWHSMVAPDDIVVVDRNCHKSILHAIMMTGAVPVFLTPTRNNFGIIGPIPKSEFEMANIQKKIDANPFIKDKK KKPRILTITQSTYDGVLYNVETLKEMLDGRIDALHFDEAWLPHAAFHDFYKDMHAIGRDRPRAKESMVFSTQSTHKLLAG LSQASQILVRDSESRKLDRDCFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEALDFRRAMRKVDAEFG TDWWFKMWGPDYLSEEGMAEREDWVLRADDRWHGFGKLAEGFNMLDPIKATVVTPGLDVDGDFADSGIPASIVTKYLAEH GVVVEKCGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDKNQPLWRVLPEFIAKNPRYEKIGLRDLCDQIHGIYKANDV ARLTTEMYLSSMVPAMKPSDAFAKMAHGEIERVSIDDLEGRVTAVLLTPYPPGIPLLIPGERFNKTIVDYLKFAREFNKK FPGFETDIHGLVAEKSNGERVYYVDCVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 6e-111 | 41 |
