Gene Information

Name : Slit_2501 (Slit_2501)
Accession : YP_003525113.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 2530967 - 2532700 bp
Length : 1734 bp
Strand : -
Note : KEGG: mag:amb2727 symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter

DNA sequence : 
ATGAAAATATTCAAATCGACCTTCTCAGCGTTTCTGGCACTTGCAGCTCTTTTTTTCACCAATCTGACGTTCGCCGCTGA
TGCCGCGATGTCTGCAGTCACGCCAGCATCAGCTGTTGCAGCGGCGGCCGCACCGGCAGAGGTGCCCGTCAACTGGCACG
CCGTCGTGATGTTCCTGATCTTTGTTGCAGTCACCCTGGTCATCACCTACTGGGCAGCGACCCGGACCAAGACGGCGACC
GACTTCTATGCTGCCGGGCGCGGTATCACCGGATTGCAGAACGGCATGGCGATCGCCGGCGACTACATGTCGGCGGCTTC
GTTCCTCGGCATCGCGGCACTGGTATACATGAACGGCTTCTATGGCCTGATCTTTTCGGTGGGTTGGCTCGTGGGTTGGC
CGATCATTCTGTTCCTGATCGCAGAACGCTTGCGTAACCTCGGCAAATATACCTATGGCGACGTTGTTTCTTTCCGTCTC
AGCCAAGGCCCGGTTCGCACCATGGCGGCGATCGGCTCGCTGATCGTGGTCATCTGGTACCTGATCGGGCAGGCGGTGGG
TGCAGGACAGTTGCTGCATACGCTGGTGCCGCAGATCTCCTACCGTGAATCGATCGTTGTGGTCGGTGCACTGATCATCA
TCTACGTCACTTTCGGCGGCATGAAGGCCACAACCTGGGTGCAGATCATCAAAGCCGGTTTGTTGCTGGGCGGTGCCACC
CTGATGGCGATCGGCGTGATGTCGCACGAAGGCTTCAGCTTTGCGAAACTGTTCAATGATGCGGTTGCTGCTCACCCGAA
ACATCTGGATATCATGAAGTCCGTGGTGCCGTTGGGGGCGAAAGCCAACCCGATCGAGTCCATTTCCCTGGGCTTGACGT
TGATGCTGGGTACGGCTGGTCTGCCGCACATCCTGATGCGTTTCTTCACGGTCACCGACTCCAAGGCGGCACGCAAATCG
GTGCTCTATGGAACCTGCTTCATCGGCTTCTTCTACGTGCTGACCTTCATCATCGGTTTTGGCGCCATCGTGCTCGTAGC
CAACAACCCGGAGTATGTGGAAAATGTCACCAAGAGCGTGCTTGCACTGAAGGGTGGCGGCAGCATGCCAGCGGTCTACC
TGTCGCATGCCCTGGGTGGCGACTTGTTCCTGGGCTTCATTGCGGCGGTCGCTTTTGCCACGATCCTTGCGGTGGTGTCG
GGTCTGACCCTGGCGGGTGCATCGGCTCTGTCGCATGACATCTATGCGCGAGTGATCATGAAGGGCAACGCGACCGAGAA
GCAGGAAGTGTGGGTATCGAAACTGAGTGTGATCGGCTTGGGCATCCTCGCGATCATTCTCGGCATCGCATTCGAGAAAC
AGAACGTTGCCTACATCGTGGCACTGACCTTCTCGATCGCTGCCTGTACCAACTTCCCCATCCTGGCACTGTCCATCTTC
TGGCGCGGGTTGACGACACGCGGCGCAGTTGTCGGCGGCTATACCGGCATATTCGGCTCCATCGGCCTGCTGATCATCGG
CCCGACGGTATGGACCAAGGTGCTTGGCATGGGCCCGGCCATCTTCCCGTATGACTTCCCGACCTTCGTTGTGTTGCCGG
CTGTTCTGATCGTCGCCTATATCGTGTCGAAGACAGACAGCAGCGAAAGCGGAGCGAAAGAACGGGCTGCGTATGACGCA
CAGATGGTTCGTGCCGAAACTGGTCTGGGTGCCGAAGTGGGTGCTTCACACTAA

Protein sequence : 
MKIFKSTFSAFLALAALFFTNLTFAADAAMSAVTPASAVAAAAAPAEVPVNWHAVVMFLIFVAVTLVITYWAATRTKTAT
DFYAAGRGITGLQNGMAIAGDYMSAASFLGIAALVYMNGFYGLIFSVGWLVGWPIILFLIAERLRNLGKYTYGDVVSFRL
SQGPVRTMAAIGSLIVVIWYLIGQAVGAGQLLHTLVPQISYRESIVVVGALIIIYVTFGGMKATTWVQIIKAGLLLGGAT
LMAIGVMSHEGFSFAKLFNDAVAAHPKHLDIMKSVVPLGAKANPIESISLGLTLMLGTAGLPHILMRFFTVTDSKAARKS
VLYGTCFIGFFYVLTFIIGFGAIVLVANNPEYVENVTKSVLALKGGGSMPAVYLSHALGGDLFLGFIAAVAFATILAVVS
GLTLAGASALSHDIYARVIMKGNATEKQEVWVSKLSVIGLGILAIILGIAFEKQNVAYIVALTFSIAACTNFPILALSIF
WRGLTTRGAVVGGYTGIFGSIGLLIIGPTVWTKVLGMGPAIFPYDFPTFVVLPAVLIVAYIVSKTDSSESGAKERAAYDA
QMVRAETGLGAEVGASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 2e-112 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_2501 YP_003525113.1 SSS sodium solute transporter superfamily BAC0564 Protein 4e-130 60
Slit_2501 YP_003525113.1 SSS sodium solute transporter superfamily BAC0570 Protein 4e-115 54