Gene Information

Name : Slit_2492 (Slit_2492)
Accession : YP_003525104.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2521150 - 2521824 bp
Length : 675 bp
Strand : +
Note : KEGG: dar:Daro_0429 response regulator receiver:transcriptional regulatory protein, C-terminal; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; transcriptional regulator domain protein

DNA sequence : 
ATGCGCATACTGATCGCCGAAGACGATGAAGTGCTGTCCGATGGCTTATGCCATTCCATGCGCCAATCCGGTTATGCCGT
CGACTGTGTGAAGGATGGCCATTCGGCCAACCTCATCCTGAGCGGAGAACAGCCGTTCGACCTGGTGATCCTCGATCTGG
GGCTGCCCAAGGTGGATGGCTTCAGCGTGTTGCGCAGCCTGCGCGAGAAGAACCGCCAGGTTCCCGTGATCATCCTTACC
GCGCGCGATGCGGAGGGTGACCGGGTCAAGGGTCTCGATCTGGGCGCCGACGACTACATGATCAAGCCGTTCAGCCTGCC
CGAACTTGAAGCGCGGGTTCGCGCGCTGATCCGGCGCGGGCAATGCGGCGTGAACCCGGTATACAGTTGCGGTACGCTCA
CTTTCGACAGCGTCGGGCGCCGCGCCAGCATCAATGGCACCACGCTGGAACTCACCACCCGCGAGTTGAGCGTACTGGAA
GCACTGATGCTGCGCACCGGCTGGGTCGTCAGCAAGGAACAATTGCTGGAAAGGCTCTACAGCTATGCGGAAGAAGCCAG
CAACAACGCGATCGAGGTATATATCCATCGCTTGCGCAAAAAGATCGAGCCCGCCGGAGTGACCATACGCACCATACGCG
GCCTCGGCTACGTCATCAACGACCTGCCCTCCTGA

Protein sequence : 
MRILIAEDDEVLSDGLCHSMRQSGYAVDCVKDGHSANLILSGEQPFDLVILDLGLPKVDGFSVLRSLREKNRQVPVIILT
ARDAEGDRVKGLDLGADDYMIKPFSLPELEARVRALIRRGQCGVNPVYSCGTLTFDSVGRRASINGTTLELTTRELSVLE
ALMLRTGWVVSKEQLLERLYSYAEEASNNAIEVYIHRLRKKIEPAGVTIRTIRGLGYVINDLPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_2492 YP_003525104.1 transcriptional regulator BAC0487 Protein 2e-38 45
Slit_2492 YP_003525104.1 transcriptional regulator BAC0083 Protein 6e-35 43
Slit_2492 YP_003525104.1 transcriptional regulator NC_002516.2.879194.p Protein 1e-32 41
Slit_2492 YP_003525104.1 transcriptional regulator BAC0638 Protein 4e-29 41
Slit_2492 YP_003525104.1 transcriptional regulator BAC0197 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_2492 YP_003525104.1 transcriptional regulator VFG0473 Protein 8e-40 44