Gene Information

Name : Slit_2218 (Slit_2218)
Accession : YP_003524833.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 2249249 - 2250568 bp
Length : 1320 bp
Strand : -
Note : KEGG: azo:azo2081 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding

DNA sequence :
ATGAGCATCAAACCAATCAATGTAGGTCTGTTGGGCATCGGTACAGTCGGCGGCGGTACCTTCACCGTGCTGCAGCGCAA
CGCAGAAGAGATCACGCGCCGAGCCGGTCGCCCCATCCGTATCACGGTGGTGGCAGACAAGAATCTGGCCCTGGCCAGAA
ATGTCACCGGCGGCAAATGCCGGGTCACTGACGATGCATTCTCCGTGGTGGCCGATCCGGAAGTCGATATCGTCGTCGAA
CTCATCGGCGGTTACGGCGTGGCGAAGGAACTCGTGCTGAAAGCGATCGCGAATGGCAAGCATGTGGTCACCGCCAACAA
GGCATTGCTGGCTACGCACGGCAACGAGATCTTCAAGGCCGCGCAGGACAAGGGCGTGATGGTCGCGTTCGAGGCGGCAG
TGGCCGGCGGCATCCCCATCATCAAGGCGCTGCGCGAAGGACTTTCCGCCAACCGCATCGAATGGATCGCCGGGATCATC
AACGGCACCACCAACTTCATCCTGTCCGAGATGCGCGACAAGGGCCTTTCCTTCGACACGGTGCTGAAGGAAGCACAGCG
TCTGGGTTATGCCGAAGCCGACCCGACCTTCGACATCGAAGGCGTGGATGCGGCGCACAAGATCACTATCCTGGCTTCGC
TGGCATTCGGCATCCCCATGCAGTTCGAAAAAGCCTACATCGAAGGTATCTCCAAGCTCGATGCGACCGACATCAAGTAC
GCCGAACAACTCGGCTACCGCATCAAACTGCTGGGCATCACCAAACGCACAGCGGAAGGTGTGGAGCTGCGCGTGCATCC
CACGCTGATCCCGACCAAGCGTCTGATCGCCAATGTCGAAGGCGCAATGAATGCGGTGGTGGTGCAGGGCGACGCCGTTG
GAGCGACCTTGTATTACGGCAAGGGCGCCGGTGCCGAACCGACCGCCAGTGCGGTGATCGCCGACCTGGTGGATGTGACA
CGCATGGCGACTTCCGACCCGCAGAACCGCGTGCCGCACTTGGCGTTCCAGCCGAACGCGATGGCTGATCTGAAGGTGCT
GCCGATGGACGATGTCATCACCAGTTATTACCTGCGCCTGCGCGTGCAGGACAAACCCGGCGTGCTGGCCGACATCACGC
GCATCCTGGCCGACGAGCAGATATCCATCGACGCCGTGATCCAGAAGGAACCGGGCGAAGGCGAAGACCAGACCGACCTC
ATCATGCTGACCCACCAGACGCGCGAGAAGCGTATCAATGCGGCGATTACCAAGATCGAAGCCTTGGGCGTGGTGGCAGG
GAAGGTGACCAAGCTGCGACTGGAAGAGCTGGGGAAATAG

Protein sequence :
MSIKPINVGLLGIGTVGGGTFTVLQRNAEEITRRAGRPIRITVVADKNLALARNVTGGKCRVTDDAFSVVADPEVDIVVE
LIGGYGVAKELVLKAIANGKHVVTANKALLATHGNEIFKAAQDKGVMVAFEAAVAGGIPIIKALREGLSANRIEWIAGII
NGTTNFILSEMRDKGLSFDTVLKEAQRLGYAEADPTFDIEGVDAAHKITILASLAFGIPMQFEKAYIEGISKLDATDIKY
AEQLGYRIKLLGITKRTAEGVELRVHPTLIPTKRLIANVEGAMNAVVVQGDAVGATLYYGKGAGAEPTASAVIADLVDVT
RMATSDPQNRVPHLAFQPNAMADLKVLPMDDVITSYYLRLRVQDKPGVLADITRILADEQISIDAVIQKEPGEGEDQTDL
IMLTHQTREKRINAAITKIEALGVVAGKVTKLRLEELGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 6e-107 57
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 6e-107 57