|
Name : Slit_2203 (Slit_2203) Accession : YP_003524818.1 Strain : Sideroxydans lithotrophicus ES-1 Genome accession: NC_013959 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2231122 - 2233707 bp Length : 2586 bp Strand : - Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Clp domain protein; Clp ATPase-like; KEGG: dar:Daro_2727 AAA ATPase, central region:Clp, N terminal; SMART: AAA ATPase DNA sequence : ATGCGTTTCGATAAGTTCACCACCAAGCTGCAGCAAGCCCTGTCCGATGCACAGAGCCTGGCCGTCGGCGCCGACAACCA GTTCATCGAGCCGCAGCACCTGCTGCTGGCCCTGATCAACGATGCCGACAGCGGGGCAGGCTCGCTGCTGGCGCGCGCGG GGGGCAACGTCAACGCGTTGAAGACTGCGCTGAATGACGCCGTGAACCGCCTGCCCAAGATAGAGGGCCACGGCGGCGAA GTGCAGGTCGGGCGCGATCTGTCCAACCTGTTCAACCTCACCGACAAGGAAGCACAGAAACGCGGTGACCAGTTCATTGC TTCGGAGATGTTCCTGCTCGCATTGACCAACGACAAGGGCGAAGCCGGCCGCCTGCTCAAGCAGCACGGTGTTGCGCGTG CGCCTTTGGAACAGGCCATCAACGCCGTGCGCGGCGGAGAATCGGTCGGCTCGCAAGAAGCTGAAGGCCAGCGCGAAGCC CTGAAGAAATATTGCATGGACCTCACCGAGCGCGCCCGCCAGGGCAAGCTCGACCCGGTGATCGGCCGCGACGACGAGAT CCGCCGCGCCATCCAGGTGCTGCAGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAACCCGGCGTGGGCAAGACCG CGATCGTCGAAGGCCTGGCACAGCGCATCATCAACGGCGAAGTGCCGGAGACTCTGAAAGGCAAACGCGTGCTGTCGCTG GACATGGCGGCATTGCTGGCCGGTGCTAAATACCGCGGCGAATTCGAGGAGCGCCTGAAATCGGTGCTCAAGGAATTGTC GCAGGACGAAGGCAAGAACATCGTGTTCATCGACGAGCTGCACACCATGGTCGGCGCAGGCAAGGCGGAAGGCGCGATGG ATGCGGGCAACATGCTCAAGCCGGCGCTCGCACGCGGCGAGCTGCACTGCATCGGCGCCACCACGCTGGACGAATACCGC AAGTACATCGAGAAGGATGCCGCGCTGGAGCGCCGCTTCCAGAAGGTGCTGGTGGACGAGCCATCGGTGGAATCCACCAT CGCCATCCTGCGCGGTCTGCAGGAAAAATATGAGCTGCACCATGGCGTCGAGATCACCGACCCGGCCATTGTCGCCGCGG CCGAACTATCGCATCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCCATCGACCTGATCGACGAGGCCGCCGCACGC ATCAAGATGGAGATCGACTCCAAACCGGAAGTGATGGACAAACTCGACCGTCGCCTGATCCAGCTGAAGATCGAGCGCGA AGCAGTGAAGAAGGAAAAGGACGAAGCCTCGCGCAAACGCATGGGCCTGATCGAGGACGAGATCAGGAAACTGGAACGCG AGTATGCCGACCTGGAAGAGATATGGAAGGCGGAAAAGGGCGCGGCACAAGGCGCGGCCAACGTGAAGGAAGAGATCGAC CATGTGAAAGCCGAGATGGTTGCCTTGCAGCGCGAAGGCAAGCTGGAGAAGGTGGCCGAGCTGCAGTACGGCAAGCTGCC GCAACTCGAAGCCAAATTGAAGGAAGCCGCGCAGCGCGAAGCCGAAGGTACAGGCACCAGGAACAAGCTGTTGCGCACCC AGGTCGGCGCCGAAGAGATCGCCGAAGTGGTGAGCCGCGCCACCGGCATCCCGGTGAGCAAGATGATGCAGGGCGAGCGC GACAAGCTGCTCAAGATGGAAGACAAGCTGCACGAGCGCGTGGTGGGGCAGGACGAGGCGGTGCGCCTGGTGTCCGACGC CATCCGCCGTTCGCGTTCCGGTTTGAGCGATCCCAACCGTCCCTATGGTTCGTTCCTGTTCCTCGGCCCCACCGGCGTGG GCAAGACCGAACTGTGCAAGACGCTGGCCAACTTTCTGTTCGATTCGGAAGACCATCTCATCCGCATCGACATGAGCGAA TTCATGGAGAAGCATTCCGTCGCCCGCCTGATCGGTGCGCCACCCGGCTATGTCGGCTATGAGGAAGGCGGCTACCTGAC TGAAGCCGTACGCCGCAAACCGTACAGCGTGATCCTGCTCGACGAAGTGGAGAAGGCGCACCCGGACGTGTTCGGCGTAC TGCTGCAAGTGCTGGACGACGGCCGCATGACCGACGGCCAGGGGCGCACCGTGGATTTCAAGAACACCGTGATCGTGATG ACCTCCAACTTGGGCAGCCAGATGATCCAGCAGATGGAAGGCGACGACTACCAGGTGGTGAAACTGGCGGTGATGGGCGA GGTGAAGAACTACTTCCGTCCCGAGTTCATCAACCGCATCGACGAGGTGGTGGTGTTCCACGCGCTGGACGAGAAGAACA TCAAGTCCATCGCGCGCATCCAGTTGCACGGCCTGGAGAAACGCCTGGCTGCGATGGAGATGAAGCTGGACGTGACCGAC GCAGCCCTGGCCGAGATCGCCAACGCCGGCTTCGATCCCGTGTACGGTGCGCGTCCGCTGAAGCGTGCCATCCAGGCGCA ACTGGAGAACCCGCTGGCCAAGCAGATCCTCGAAGGCCACTTCGCCGCCAAGGACACCATCAAGGTGGACTGCAAGGGCG GGATGATGAAGTTCGACAAGGCGTAA Protein sequence : MRFDKFTTKLQQALSDAQSLAVGADNQFIEPQHLLLALINDADSGAGSLLARAGGNVNALKTALNDAVNRLPKIEGHGGE VQVGRDLSNLFNLTDKEAQKRGDQFIASEMFLLALTNDKGEAGRLLKQHGVARAPLEQAINAVRGGESVGSQEAEGQREA LKKYCMDLTERARQGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPETLKGKRVLSL DMAALLAGAKYRGEFEERLKSVLKELSQDEGKNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVLVDEPSVESTIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR IKMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASRKRMGLIEDEIRKLEREYADLEEIWKAEKGAAQGAANVKEEID HVKAEMVALQREGKLEKVAELQYGKLPQLEAKLKEAAQREAEGTGTRNKLLRTQVGAEEIAEVVSRATGIPVSKMMQGER DKLLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTLANFLFDSEDHLIRIDMSE FMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFGVLLQVLDDGRMTDGQGRTVDFKNTVIVM TSNLGSQMIQQMEGDDYQVVKLAVMGEVKNYFRPEFINRIDEVVVFHALDEKNIKSIARIQLHGLEKRLAAMEMKLDVTD AALAEIANAGFDPVYGARPLKRAIQAQLENPLAKQILEGHFAAKDTIKVDCKGGMMKFDKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-106 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Slit_2203 | YP_003524818.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 2e-109 | 41 |
| Slit_2203 | YP_003524818.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 5e-106 | 41 |
