Gene Information

Name : Slit_1832 (Slit_1832)
Accession : YP_003524448.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1860238 - 1860678 bp
Length : 441 bp
Strand : -
Note : KEGG: nmu:Nmul_A2590 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G

DNA sequence : 
ATGCGGCACTACACAGAGAGAGCCCTATCAGTACCTGAGTCTGTATCCGGATTTACGCTGCTGGAACTGCTGGTGGTGAT
GGTCATCATCGGATTGCTGGCCGGCTATGTCGGGCCCAAGTATTTCGCCCAGATCGGCAAGTCAGAGATCAAGGTGGCGA
AGTCGCAGATGGTTGCGCTGGAGAAAGCGCTGGACCAGTACCGTCTGGATACCGGCCATTACCCGACCTCGGAACAGGGG
CTGAGTGCACTGAATGCTGCCCCCCCCAATGAGCCTAAGTGGGATGGACCGTACCTGAAGAAAGCCGTGCCGCCGGATCC
GTGGGGCAATCCATATCTTTACATGATACCAAGCGAACATGGTGGCGAATTCGATCTGTATTCCTATGGCAAGGATGGAC
AACCCGGCGGCGAAGGTGAGGCGGCGGATATCTATAATTGA

Protein sequence : 
MRHYTERALSVPESVSGFTLLELLVVMVIIGLLAGYVGPKYFAQIGKSEIKVAKSQMVALEKALDQYRLDTGHYPTSEQG
LSALNAAPPNEPKWDGPYLKKAVPPDPWGNPYLYMIPSEHGGEFDLYSYGKDGQPGGEGEAADIYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 7e-25 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-25 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_1832 YP_003524448.1 general secretion pathway protein G VFG2050 Protein 2e-25 52
Slit_1832 YP_003524448.1 general secretion pathway protein G VFG0180 Protein 1e-23 48
Slit_1832 YP_003524448.1 general secretion pathway protein G VFG1871 Protein 1e-24 45