Gene Information

Name : Slit_1750 (Slit_1750)
Accession : YP_003524368.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1758477 - 1759133 bp
Length : 657 bp
Strand : -
Note : KEGG: nmu:Nmul_A1972 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGCAAGCAGCAGGGCTCACCAAGCAAGTGTTAAGTGGCGATCAGCCGCTCACGATATTGCACGATGTCACTTTCACGGT
GAAAGCAGGCGAGAGCCTCGCCATCGTCGGCGCCTCCGGTTCCGGCAAATCCACCTTGCTCGGCCTGCTGGCCGGGCTGG
ATGTACCGACCGGCGGCAAGGTATTGCTGCATGGCACCGACCTGTTCGCGCTGGACGAGGACGGTCGCGCAAGGCTGCGC
GGCGAACTGGCCGGCTTCGTGTTCCAGTCGTTCCAGCTGCTGCCCGCGCTGAATGCGCTGGAGAACGTGATGCTGCCGCT
GGAGCTGGCCGGCGCAAAGGATGCGCGCCAGCGCGCCGAAGCGTCGTTGCAGCAAGTCGGCCTTGCCGCGCGCATGCATC
ATGTGCCGAAACATCTCTCCGGCGGCGAGCAGCAGCGCGTGGCACTGGCGCGTGCCTTCGTCACCCGGCCGAAGATACTC
TTTGCCGACGAGCCCACCGGCAACCTCGATGCCGACACCGGTGCGCAAATCATCGAGCTGATGCTGGAACTGAACCGCGC
ACAGGGCACGACGCTGATCCTGGTTACCCATGACGATGCGCTGGCAAAGCGTTGCGGCAAGCAATTACGACTTGCTGCAG
GACGGGTGATGGTATGA

Protein sequence : 
MQAAGLTKQVLSGDQPLTILHDVTFTVKAGESLAIVGASGSGKSTLLGLLAGLDVPTGGKVLLHGTDLFALDEDGRARLR
GELAGFVFQSFQLLPALNALENVMLPLELAGAKDARQRAEASLQQVGLAARMHHVPKHLSGGEQQRVALARAFVTRPKIL
FADEPTGNLDADTGAQIIELMLELNRAQGTTLILVTHDDALAKRCGKQLRLAAGRVMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-24 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Slit_1750 YP_003524368.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 51
Slit_1750 YP_003524368.1 ABC transporter NC_012469.1.7686878. Protein 8e-34 48