Gene Information

Name : Slit_1530 (Slit_1530)
Accession : YP_003524153.1
Strain : Sideroxydans lithotrophicus ES-1
Genome accession: NC_013959
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-ACP reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1539395 - 1540138 bp
Length : 744 bp
Strand : +
Note : KEGG: tbd:Tbd_1549 3-oxoacyl-[acyl-carrier-protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGACACTGCAAGGACAAATCGCACTGGTTACGGGCGCTTCGCGTGGTATCGGTCAAGCCATCGCGCTGGAGCTGGGCAG
GCAAGGTGCGACCGTGATCGGCACCGCCACCAGCGACAATGGCGCACAAGCCATCGGTGCCTATCTGGATGCTGCCGGCA
TCAAGGGCAAGGGTTTTGCGTTGAACGTCAATGATGCCGCCCAGACCGAGCAGGTACTGGCGGCGATTCGCGAACAGTTC
GGCGAAATCTCGATCCTGGTGAACAACGCGGGTATCACCAAGGACAACCTGCTGGCACGCATGACCGATGAAGAATGGGA
TGACGTGCTGTCGACCAACCTCAAATCCGTGTTCCGCCTGAGCCGCGCCGTTTTGCGTGCCATGATGAAGGCCCGGGGCG
GCCGCATCATCAGCATTTCCTCGGTGGTCGGCAGCATGGGCAATCCTGGTCAGGCCAACTATGCCGCCTCCAAGGCTGGC
ATGGCCGGCTTCACCAAATCGCTGGCGCAGGAGATCGGCAGCCGTAATATCACCGTGAATTGCGTCGCACCGGGCTTCAT
CGACACCGATATGACGCACGCCTTGGGCGAAGAACAGCGCGCCAAACTGGTCGAACATGTACCTTTGAAACGTCTCGGCC
AGCCTGCCGACATTGCAGCTGCTGTAGCCTTTCTGGCCAGTCCGGGAGCGGCTTACATCACCGGCGTCACGTTGCATGTG
AACGGCGGGATGTACATGGAGTAA

Protein sequence :
MTLQGQIALVTGASRGIGQAIALELGRQGATVIGTATSDNGAQAIGAYLDAAGIKGKGFALNVNDAAQTEQVLAAIREQF
GEISILVNNAGITKDNLLARMTDEEWDDVLSTNLKSVFRLSRAVLRAMMKARGGRIISISSVVGSMGNPGQANYAASKAG
MAGFTKSLAQEIGSRNITVNCVAPGFIDTDMTHALGEEQRAKLVEHVPLKRLGQPADIAAAVAFLASPGAAYITGVTLHV
NGGMYME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-30 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 7e-32 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 5e-30 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 4e-30 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-30 41