|
Name : Slit_0014 (Slit_0014) Accession : YP_003522643.1 Strain : Sideroxydans lithotrophicus ES-1 Genome accession: NC_013959 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 17246 - 19264 bp Length : 2019 bp Strand : + Note : TIGRFAM: transketolase; PFAM: transketolase central region; transketolase domain protein; KEGG: tbd:Tbd_0159 transketolase; SMART: transketolase central region DNA sequence : ATGGCTGCGGCACGTAATGTAACCCCCCCAAAATTTAACGACACCACAGGTGCGATTCGCATGCTGGCAGTCGATGCGGT ACAAAAGGCCAACTCCGGACACCCCGGTGCCCCGATGGGTATGGCAGAGATCGCCGAGGTGCTATGGAACCATCACCTTC GTCACAACCCGGCGAACCCGAAATGGGCAGACCGCGACCGTTTTGTACAGTCCAATGGCCATGGCTCGATGTTGATCTAC GCGTTGTTACATCTGACCGGTTATGACCTGCCAATGGAAGAGCTGAAGCGTTTCCGCCAGATGCATTCCAAGACCCCCGG TCACCCCGAATATGGCTATACCGTCGGCGTCGAAACCACTACTGGACCACTGGGCCAGGGCATCACCAACGCCGTGGGTA TGGCGATGGCCGAAAAACTGCTGGCCAACGAATTCAATAAGCCCGGGCACGAAATCGTTAACCACCACACTTATGTATTC ATGGGCGACGGATGCATGATGGAAGGCATCTCGCATGAGGCCTGTGCTTTGGCTGGCACATGGGGCTTGGGCAAGCTGAT TGCTTTCTGGGATGACAATAACATCTCTATCGACGGACATACCGACGGCTGGTTCACCGATGACACGCCAAAACGTTTCG AGGCATACGGCTGGCATGTCATTGCCGACGTCCAGGGGCATGTTCCGGAAGAGATCAATGCTGCGATCATTGCGGCCAAG GCCGTTACCGACAAGCCTACGCTGATTTGTTGCAAGACCATCATCGGCGCCGGTTCTCCCAACAAGGAAGGCACTCACGA CGTACATGGAGCGGCGTTGGGCGATGCGGAAGTGACTGCTACTCGCGAACATATCGGCTGGAAATATCCTCCGTTCGAAA TTCCTGCGCACGTTTATGATGCCTGGGATGCGCGCACCAAAGGCGAAGGGCTGGAGAAGCTGTGGAATAACAAGTTTGCA GAATACAAGAAAGCCTTCCCGAAAGAAGCTGCAGAATTCGAGCGTCGCATGAAAGGCGAACTGCCGGCAAACTGGGCAGA CTTTGCTGCCAAGGCCATTGCCCAGGTTAACGAAAAAGCTGAGACCATTGCGACACGCAAGGCCTCGCAAAATTCGATCA ATGCCCTGGTTCCTGCCCTGCCCGAGTTTTTGGGCGGATCCGCTGACCTGACCGGTTCCAACCTGACCAACTGGACCGGC GCACACCACGTTTCAGGCAAGAAACCCGGTAACTACATCAGCTACGGCGTACGCGAGTTTGGCATGTCCCACATCATGAA CGGTATGGCCTTGCATGGTGGCTTGCTGCCTTTCGGCGGCACCTTCCTGATGTTTTCGGAATATGCCCGCAATGCTTTGC GCATGTCGGCATTGATGAAACAGCGCGTGATCTATGTGTACACCCACGACTCTATCGGTCTGGGCGAGGACGGCCCGACA CACCAGCCAGTGGAACAAACCACCACCCTGCGCTATATCCCCAACATGGATACTTGGCGTCCGTGCGATACCGTCGAATC CATGGTGTCATGGGTATGCGCGGTCGAGCGCAAGACCGGGCCTTCCTCGCTGATCTTCAGCCGCCAGAATCTGGCTTTCC AGAAACGCGATGCGAAGCAGATCGAAAACATCCGCAAGGGCGCTTATGTGCTGTCCGAAGCCGCAGGCGGCAAGCCGCAG GCGGTCATCATCGCTACCGGTTCTGAAGTCGATCTGGCCATGAAGGCACAAGCGGCACTGGCGGCTGAAGGCGTCAACGT TCGTGTGGTATCGATGCCCTCGACCAACGTATTCGACCGTCAGGACCAGGCCTACAAGGACAGCGTATTGCCGAAGGGCA TCAAGCGCGTGGCCGTAGAAGCAGGCGTAACCGGACTTTGGTATAAATATGTCGGTCTTGAAGGCGCAGTGGTTGGCATG GATTGCTTCGGCGAATCCGCACCGGCACCGGAGTTGTTCAAGCATTTTGGTTTCACCGTTGAGAACGTGGTTGCAACTGT GAAGAAGGTTATTGGCTAA Protein sequence : MAAARNVTPPKFNDTTGAIRMLAVDAVQKANSGHPGAPMGMAEIAEVLWNHHLRHNPANPKWADRDRFVQSNGHGSMLIY ALLHLTGYDLPMEELKRFRQMHSKTPGHPEYGYTVGVETTTGPLGQGITNAVGMAMAEKLLANEFNKPGHEIVNHHTYVF MGDGCMMEGISHEACALAGTWGLGKLIAFWDDNNISIDGHTDGWFTDDTPKRFEAYGWHVIADVQGHVPEEINAAIIAAK AVTDKPTLICCKTIIGAGSPNKEGTHDVHGAALGDAEVTATREHIGWKYPPFEIPAHVYDAWDARTKGEGLEKLWNNKFA EYKKAFPKEAAEFERRMKGELPANWADFAAKAIAQVNEKAETIATRKASQNSINALVPALPEFLGGSADLTGSNLTNWTG AHHVSGKKPGNYISYGVREFGMSHIMNGMALHGGLLPFGGTFLMFSEYARNALRMSALMKQRVIYVYTHDSIGLGEDGPT HQPVEQTTTLRYIPNMDTWRPCDTVESMVSWVCAVERKTGPSSLIFSRQNLAFQKRDAKQIENIRKGAYVLSEAAGGKPQ AVIIATGSEVDLAMKAQAALAAEGVNVRVVSMPSTNVFDRQDQAYKDSVLPKGIKRVAVEAGVTGLWYKYVGLEGAVVGM DCFGESAPAPELFKHFGFTVENVVATVKKVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 67 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 64 |
