Gene Information

Name : Nhal_3989 (Nhal_3989)
Accession : YP_003522588.1
Strain :
Genome accession: NC_013958
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 20241 - 21041 bp
Length : 801 bp
Strand : -
Note : PFAM: protein of unknown function DUF932; KEGG: noc:Noc_A0001 hypothetical protein

DNA sequence :
ATGCGCACTATGACACAACCCTTGAGTAAAAATCAGCTCAGGAAAAAAGCCTCTTCTGTATTCGCTACGGCAGCGCACGA
GCGGGTCTCTGGCCAGTATCAGTTTATCTCTACCCTGGCCATGATCGAGGCCCTCGACCGGGAAGGGTGGATGCCGGTGC
ACGCTGAGGAAAACCGAGTTCGGAGCTCCGACCGAAAAGGGTTTACCAAGCATTTGCTCCGTTTCCGCCGGTTTGATGGC
GAACTTCCCATGGTGGGCGATAGTTTCCCGGAAATTGTGCTCGTGAACTCCCATGATGGGTCATGCGCCTACCAGCTCCA
TGCCGGTTTATTCCGTTTGGTTTGTTCTAACGGAATGATTGTTGCGGATTTCGATATGGGACAGGTTAAGCGGCGGCATA
CTGGCGACGTGGTTAGGGAGGTCATTGAAGGCACGTATGAAATTGTGGAGGAACTGCCAAAGATTGCAAAGAAGGTAGAA
AACTTCAAGAGCATTGAGCTTTCCCCGCGGGAGCAAGAAATCTTTGCCGAGTCTGCCTTGCGATTCCGATGGGAGGAAGG
CAAGGCGCCGATCATTTCCCGGTCGCTGCTTAAGCCCAGGCGGTATGAAGACCAGAGCAACGATATGTGGGCTACTTACC
AGCGGGCACAGGAAAACATGTTGAAAGGCGGAGTCCAAGGCAGGTCTGCTATTGGGCGTCGGATTACTACCCGAGCAGTA
AAGTCGGTAGGCGGTAACGTCAAGCTCAATAAGGCTCTTTGGTTCCTCACTGAACAAATGGCTGAACTTAAGAAGGCATA
A

Protein sequence :
MRTMTQPLSKNQLRKKASSVFATAAHERVSGQYQFISTLAMIEALDREGWMPVHAEENRVRSSDRKGFTKHLLRFRRFDG
ELPMVGDSFPEIVLVNSHDGSCAYQLHAGLFRLVCSNGMIVADFDMGQVKRRHTGDVVREVIEGTYEIVEELPKIAKKVE
NFKSIELSPREQEIFAESALRFRWEEGKAPIISRSLLKPRRYEDQSNDMWATYQRAQENMLKGGVQGRSAIGRRITTRAV
KSVGGNVKLNKALWFLTEQMAELKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-50 44
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-50 44
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-51 44
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-51 44
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-51 43
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 1e-51 43
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-51 43
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-50 43
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-51 43
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-51 43
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 1e-51 43
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-50 42
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 4e-54 42
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 4e-51 42
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 4e-51 42
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-50 41
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 5e-51 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nhal_3989 YP_003522588.1 hypothetical protein VFG1676 Protein 1e-50 43
Nhal_3989 YP_003522588.1 hypothetical protein VFG0658 Protein 4e-52 43
Nhal_3989 YP_003522588.1 hypothetical protein VFG1526 Protein 2e-51 43
Nhal_3989 YP_003522588.1 hypothetical protein VFG1615 Protein 2e-50 42