Gene Information

Name : yfcI (PANA_0081)
Accession : YP_003518376.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 86839 - 87783 bp
Length : 945 bp
Strand : +
Note : Transposase; Similar to Klebsiella pneumoniae, putative cytoplasmic protein (NCBI: NP_943500.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
GTGCTTATTATCATTCACAGGCCGGATGTGATGAAAAAAAACACTACGCCAACACCGCACGATGCGACTTTCCGGCAATT
TTTAACCCAGCCCGAAATTGCCCGCGATTTTATGGATATTCATCTCCCTGAAGAGCTGCGCGCTGTTTGTGATCTCAATA
CGTTAAAGCTGGAATCAGGTTCTTTTGTCGAAGCGGATCTTCGTCAATATTTTAGCGATGTGCTTTACAGCCTGAAAACC
GCAGGCGGTGAGGGTTATGTTCATGTGCTGATCGAGCATCAGTCTTCACCCGATAAACATATGGCGTTCAGGCTCCTGCG
CTACGCGGTAGCGGCAATGCAACGCCATCTCGAAGCTGGCCATAAAGCCTTGCCGCTGGTGATACCCGTACTGTTTTATA
TGGGGAGACGCAGGCCATATCCTTATTCCACCTGTTGGCTGGATGAATTTACCCATCCCGCGCTGGCCGGTAAATTGTAC
AGCACGCGCTTTCCGCTGGTTGATGTCACGGTAATATCGGATGACGAAATAGCGGGCCATCGCAGTATGGCTGCGCTGAC
GCTGTTACAAAAGCATATCCATCAGCGCGATCTCGCCGATCTGATGGACAGGCTTGTTCCTGTGCTGCTGTCAGGTTATC
TTTCATCATCACAGGTCGTATCATTGGTACATTATATCATGCAGGCGGGGGAAACCCCGGCCGTCGAGGCTTTCATTCAG
GAACTCGCCCTGCGGGTACCGCAACATGGAGACGCGCTCATGACCATTGCACAGCAGCTTGAACAAAAAGGTATTCAGAA
AGGCCTTGAGCAAGGTATTCAGAGAGGCCGCGATGAAGGGAAACGTGAAGTCGCGCGAACCATGCTACAGAATGGTCTCG
ATCTTTACACCATAATGAAAATGACAGGCCTGAGCGAGGAAGAACTGGCGCAGATTCAACACTGA

Protein sequence :
MLIIIHRPDVMKKNTTPTPHDATFRQFLTQPEIARDFMDIHLPEELRAVCDLNTLKLESGSFVEADLRQYFSDVLYSLKT
AGGEGYVHVLIEHQSSPDKHMAFRLLRYAVAAMQRHLEAGHKALPLVIPVLFYMGRRRPYPYSTCWLDEFTHPALAGKLY
STRFPLVDVTVISDDEIAGHRSMAALTLLQKHIHQRDLADLMDRLVPVLLSGYLSSSQVVSLVHYIMQAGETPAVEAFIQ
ELALRVPQHGDALMTIAQQLEQKGIQKGLEQGIQRGRDEGKREVARTMLQNGLDLYTIMKMTGLSEEELAQIQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 5e-93 62
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 4e-94 62
pilW CAF28495.1 putative transposase Not tested YAPI Protein 1e-95 62
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 7e-85 55
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 2e-68 49