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Name : hofB (PANA_0734) Accession : YP_003519029.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Virulence Product : HofB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 856733 - 858139 bp Length : 1407 bp Strand : - Note : Protein transport protein HofB; Similar to Pantoea sp. At-9b, type II secretion system protein E (NCBI: ZP_05729800.1); COG: Intracellular trafficking, secretion, and vesicular transport; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : TTGCCGATCGGGGAGGTGCCTATGCCCACGTCTGATGATGCGATTGCGCTCATCTGCCAGCGCTTTCGGGCGATTGTCCT TGAGCACAGTGCGACACACTTGCGCCTTGCCGTTCCTGAAAGCGTCCCGGCGGGCCTGATGGAGGCATTACAGTTTGCCA GCCAGTGTCAGGCAGAGGTGGAGTGCTGGCCTCGTGCCCGGATAGAACAGTTTGAATCGATGCGTAAACCTTTGGTGGCC AATGAAAAAGCTCCCGGCGAATCGACCATTGATACGGCCAGTCAGCTTTTGCGCCAGGCAACTCTGCGTCGTGCATCGGA TATTCATATCGAACCTTATCAGAGCACCCTGCGTATTCGCCTGCGGATTGACGGGGTCCTGCATCCTCTCCCCCTGCAGT TTGATACACAACCGGCTGCGCTGCTGGCACGACTGAAAATTCTGGCCGGTCTGGATATTGCCGAACGGCGCCTGCCTCAG GACGGACAGTTTAGTTGTGACATTGACGGAAAATCGGCCTCTTTTCGGCTCTCTACCCTGCCCGTTCAGGGCGGCGAAAA AGCCGTCGTTCGCCTGCTTCAGAGTGAGGGCGCGGCCTTGTCGCTGGACAAGCTGGGATTACCCACCGCGCAGTTACGCC TTCTGACCGCCGCGCTCAGGCAGCCACAAGGGCTGATTTTGGTAACGGGCCCTACCGGGAGTGGCAAAACCTTCACGCTT TACAGTGGCCTGAGCGCGATCAACCAGCCTGATAAGAATGTCTGCAGCGTGGAAGATCCTGTTGAAATCCCTCTCCCCGG TATCAACCAGACCCAGATTAATCCAAAGTATGGCCTTGATTTTAATCGCGTGTTACGCGCCCTGTTACGTCAGGATCCGG ACGTGATGATGGTCGGTGAAATACGTGACGGCGAGACGGCGGAGATTGCCGTTAAGGCAGCTCAGACCGGTCATCTGGTT CTCTCTACCCTGCACACCAACTCGACAGCGGAAACGCTGACGCGCTTGCGTCAAATGGGCATTCCCGGTTATCTGCTGGG TTCCGCACTTCGTCTGATCGTTGCCCAGCGGCTGGTCAGGCGTTTGTGCCCTCACTGCCGTAAGCCAGCACAGGCGGTTG CCCACTTTCCCGCCTCACTTTGGCCCGGAACGTTACAAACCTGGCGGGCGCCGGGCTGCGATCACTGCTTCTCCGGTTAT TTTGGTCGGCTGGCCTTGTTTGAATTACTGCCCATAACGGCTAAGTTACAAAACGCCATTGCCGCCGAAATGCCACTTGA GGGCTTGCTGAGTCTGGCAAAACAGCAGGGCATGCGCACCCTGCTGGCATCAGGTCTTGAAGCCGTCAGCCGTGGGGATA CCTCCCTGGAAGAAATGCAGCGCGTTGTCGGACTGGATAATGACTAG Protein sequence : MPIGEVPMPTSDDAIALICQRFRAIVLEHSATHLRLAVPESVPAGLMEALQFASQCQAEVECWPRARIEQFESMRKPLVA NEKAPGESTIDTASQLLRQATLRRASDIHIEPYQSTLRIRLRIDGVLHPLPLQFDTQPAALLARLKILAGLDIAERRLPQ DGQFSCDIDGKSASFRLSTLPVQGGEKAVVRLLQSEGAALSLDKLGLPTAQLRLLTAALRQPQGLILVTGPTGSGKTFTL YSGLSAINQPDKNVCSVEDPVEIPLPGINQTQINPKYGLDFNRVLRALLRQDPDVMMVGEIRDGETAEIAVKAAQTGHLV LSTLHTNSTAETLTRLRQMGIPGYLLGSALRLIVAQRLVRRLCPHCRKPAQAVAHFPASLWPGTLQTWRAPGCDHCFSGY FGRLALFELLPITAKLQNAIAAEMPLEGLLSLAKQQGMRTLLASGLEAVSRGDTSLEEMQRVVGLDND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-64 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-64 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_003519029.1 | HofB | VFG2426 | Protein | 3e-75 | 49 |
| hofB | YP_003519029.1 | HofB | VFG2048 | Protein | 8e-66 | 45 |
| hofB | YP_003519029.1 | HofB | VFG0182 | Protein | 9e-65 | 45 |
| hofB | YP_003519029.1 | HofB | VFG1876 | Protein | 4e-67 | 44 |
