Gene Information

Name : murD (PANA_0717)
Accession : YP_003519012.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : MurD
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : -
Position : 838143 - 839459 bp
Length : 1317 bp
Strand : +
Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; Similar to Pantoea sp. At-9b, UDP-N-acetylmuramoylalanine/D-glutamate ligase (NCBI: ZP_05729783.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGGCTGACTATCGCGGGAGAAAAGTTGTCATCATCGGACTGGGCCTGACCGGGCTGTCCTGTGTTGATTTCTTTGTAGC
GCAGGGCGTAACGCCACGCGTGATGGATACCCGTATGTCACCGCCCGGGCTGGACAAGCTGCCTGAGCAGGTGGAGCGCT
ATGTGGGCGGGATCAACAGCGACTGGCTGTTGGCTGCCGACCTGATTGTTGCCAGCCCCGGTATTGCGCTGGCACATCCG
GCGCTGTGCGAAGCCGCGGATGCGGGCATCGAAATCGTGGGCGATATTGAGCTGTTTTGCCGTGAAGCACAGGCATCCAT
CGTGGCAATTACCGGTTCGAACGGAAAAAGTACGGTCACCACCTTAGTCGGCGAAATGGCGAAGGCCGCAGGCTGGCAGG
TCGGTGTCGGCGGCAACATTGGCTTACCCGCCCTCAGCCTGCTGAAAGCGCCTGCGCAGCTCTATGTCCTTGAACTGTCC
AGCTTTCAGCTGGAGACCACTCACAGCCTGAAAGCCGCAGCGGCCACCATCCTTAACGTGACTGAAGATCATATGGATCG
CTATCCGTTAGGTATGCAGCAGTATCGGGCAGCAAAACTGCGGATTTACGAAAATGCGCAGGTCTGTGTCGTGAACGCGG
ATGATGGCATGACGATGCCGGTACGCGGCGCTGACGCGCGCTGCGTGAGTTTTGGTATCGATATTGGTGATTATCACCTC
AATAAGCAGCAGGGCAGCATCTGGCTGCGCGCCAAAGGCGAGAAGGTCCTGAATACCGACGAAATGACGCTGGTAGGCCA
ACATAATTACACCAATGCGCTGGCGGCTTTAGCGCTGGCAGATGCGGTAGGGCTGCCCCGCTCAACCAGCCTGTCTGCGC
TGGCAGCGTACTCTGGACTGCCGCACCGCTTTCAACTGGTTCATCAGAGTCGCGGGGTGCGCTGGATCAATGATTCAAAA
GCGACCAACGTTGGCAGCACGGAAGCGGCACTGAAAGGCTTACAGGTTAACGGCACGCTCTGGCTGCTGCTCGGGGGCGA
TGGGAAATCGGCTGATTTCTCGCCGCTGGCCACTTATCTGCAAGGCGATCGTATCCGGCTGTACTGCTTTGGTCGCGATG
GCGATGCGCTCGCCGCGCTGCGGCCTGACGTGGCGGTGCGTACCGATACGCTGCAGCAGGCCATGGAGCAGATCGCCAGA
CAGGTCCAGCCAGACGATATGGTACTGCTTTCCCCCGCCTGTGCCAGCCTCGATCAGTTTCGCAATTTTGAACAGCGCGG
TGACGTCTTCGCGCAGCTGGCAAGGGAGTTAAGCTGA

Protein sequence :
MADYRGRKVVIIGLGLTGLSCVDFFVAQGVTPRVMDTRMSPPGLDKLPEQVERYVGGINSDWLLAADLIVASPGIALAHP
ALCEAADAGIEIVGDIELFCREAQASIVAITGSNGKSTVTTLVGEMAKAAGWQVGVGGNIGLPALSLLKAPAQLYVLELS
SFQLETTHSLKAAAATILNVTEDHMDRYPLGMQQYRAAKLRIYENAQVCVVNADDGMTMPVRGADARCVSFGIDIGDYHL
NKQQGSIWLRAKGEKVLNTDEMTLVGQHNYTNALAALALADAVGLPRSTSLSALAAYSGLPHRFQLVHQSRGVRWINDSK
ATNVGSTEAALKGLQVNGTLWLLLGGDGKSADFSPLATYLQGDRIRLYCFGRDGDALAALRPDVAVRTDTLQQAMEQIAR
QVQPDDMVLLSPACASLDQFRNFEQRGDVFAQLARELS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 9e-68 44
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 9e-68 44