|
Name : rbkS (PANA_0632) Accession : YP_003518927.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : RbkS Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 726780 - 727697 bp Length : 918 bp Strand : + Note : Ribokinase; Similar to Yersinia frederiksenii ATCC 33641, Deoxyribokinase (NCBI: ZP_04634138.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : ATGGATATCGCCGTTATTGGTTCAAACATGGTGGATTTAATCACCTATACCAACAGCTTTCCTAAAGCTGGAGAGACGCT TGAGGCACCCGATTTTGCGATTGGCTGTGGGGGAAAAGGGGCCAATCAGGCTGTGGCGGCAGCAAAACTGGGTGGCGAGG TGATGCTGGTCAGTAAAGTCGGCGATGACCTGTTTGCGCCCACCACGTTGGCTAATTTGCAACAGCAGGGCGTGGATACG CGTTATGTCACAACCGAAAAAGGGGTTTCCAGCGGCGTGGCCCCCATTTTTGTTGATGATCAGTCGCAAAACCGCATTTT AATTATCAAAGGCGCGAATCAGCACCTCAAGCCGGCGGATATTGATGCTGCGGGTGATGCGTTGAAACGCTGTCGGTTGA TCATTCTTCAGCTCGAAATTCCGCTGGAAACGGTGTACTACGCTATCGATTTTGCCCGTCAGCATGATATTCGCGTCATC CTCAACCCTGCGCCCGCCGTGGCAGACCTGGATATCCGCTATGCCTGCCAGTGCGACTTTTTTATGCCCAATGAGACGGA GCTGGAAATTCTTACCGGGATGCCGGTGGGGACGGATGATGACGTCAGGCTGGCCGGTGCATCCTTGCTGAAACGTGGCC TGAAAAACCTGATCGTTACGCTGGGCAGTCGCGGATCGTTGTGGATGACCGGAGAGACACAGCACCAGGTTGCGCCTGTG CCGGTTAAGGCAGTGGATACCAGCGGTGCGGGTGATGCGTTTATCGGCTGCTTCGCTCATGAACTGGTGAAAACGGGCGA TATTCCTGCGGCGATGGCCAAAGCCTCCGCCTACGCGGCCTGTAGCGTGACGGCGCGCGGCACACAACGTTCTTATCCTG ATACAGCGGAATTTCAGCGCTTTCTTGACCTTCAGTGA Protein sequence : MDIAVIGSNMVDLITYTNSFPKAGETLEAPDFAIGCGGKGANQAVAAAKLGGEVMLVSKVGDDLFAPTTLANLQQQGVDT RYVTTEKGVSSGVAPIFVDDQSQNRILIIKGANQHLKPADIDAAGDALKRCRLIILQLEIPLETVYYAIDFARQHDIRVI LNPAPAVADLDIRYACQCDFFMPNETELEILTGMPVGTDDDVRLAGASLLKRGLKNLIVTLGSRGSLWMTGETQHQVAPV PVKAVDTSGAGDAFIGCFAHELVKTGDIPAAMAKASAYAACSVTARGTQRSYPDTAEFQRFLDLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoK | ADD91722.1 | deoxyribokinase DeoK | Not tested | PAI-I AL862 | Protein | 5e-88 | 63 |
| unnamed | CAE85173.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 6e-88 | 63 |
| ORF4 | AAK27331.1 | unknown | Not tested | PAI-I AL862 | Protein | 2e-81 | 60 |
