Gene Information

Name : PANA_0504 (PANA_0504)
Accession : YP_003518799.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical Protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 586920 - 587675 bp
Length : 756 bp
Strand : -
Note : Cytoplasmic Protein; Similar to Klebsiella pneumoniae 342, hypothetical protein KPK_2646 (NCBI: YP_002238476.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGCAGAAGAAAATTTTACTGGTCGGGGAATCCTGGACCAGCACGTCCGTTCACGTTAAAGGCTTCGATCAGTTTGCCAC
CGCCACCTGGCACAATGGTGCAACCGACTTTATGGCGGCGCTGGCCGACAGCGACTATGCCATCACCTATATGCCCGCGC
ACGCGGCGGCGACCGAATTTCCGCTGACGCTGGCCGGGCTGCAAGCGTGGGACGCGATCATTCTGTCGGATATCGGTGCA
AACACGTTACTGCTGCATCCGGATACCTGGCTGAAGAGCCAGCGCACGGCGAACCGTCTGACGCTGATCCACGACTATGT
GGCGGCGGGCGGTGCCTTGATGATGATCGGCGGCTACTTCAGTTTTCAGGGCATCAACGGCGGCGCGCGCTATCGCAACA
CGGCGGTCGAGAAAGTGCTGCCGGTACGCTGCCTGGCCTGGGACGACCGCATCGAAACGCCCGAAGGTTCTTATCCGAGC
GTCACCGAATCCCACACGCTGTTTACCGACATGCCTGACGAATGGCCGTGGTTACTGGGCTATAACGAAGTGGAAATGCA
CCCTGAAGGCAAACTGCTGGCAACCATTGCCGGCACCGCGCATCCGTTGCTGGCGGTGCGCGAATATCAGCAGGGCCGCT
CGCTGGTGTGGACCAGCGATATGTCTGCCCACTGGCTGCCACAGGAATTTGCCCAGTGGCAGGGTTATCGCCAGCTGTGG
ATCAACTGTCTTGACTGGTTAACGGTTCGTCACTGA

Protein sequence :
MQKKILLVGESWTSTSVHVKGFDQFATATWHNGATDFMAALADSDYAITYMPAHAAATEFPLTLAGLQAWDAIILSDIGA
NTLLLHPDTWLKSQRTANRLTLIHDYVAAGGALMMIGGYFSFQGINGGARYRNTAVEKVLPVRCLAWDDRIETPEGSYPS
VTESHTLFTDMPDEWPWLLGYNEVEMHPEGKLLATIAGTAHPLLAVREYQQGRSLVWTSDMSAHWLPQEFAQWQGYRQLW
INCLDWLTVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 4e-45 43
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 5e-45 43
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 5e-45 43
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA_0504 YP_003518799.1 hypothetical Protein VFG0482 Protein 2e-45 43