Gene Information

Name : vat (PANA_0502)
Accession : YP_003518797.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Resistance
Product : Vat
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 585049 - 585684 bp
Length : 636 bp
Strand : -
Note : Virginiamycin A acetyltransferase; Similar to Thioalkalivibrio sp. HL-EbGR7, streptogramin A acetyl transferase (NCBI: YP_002515225.1); COG: Defense mechanisms; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGAACGGACCCGCTCCCACCGATCCCCATCCTCTGGCTGGCTTTCCGCAGGTATGTTTTATCAAGAACACCGTCCGCAA
TCCCAATATTATCGTGGGTGATTACACCTATTATGATGACCCGCTGGACGCGGAAAACTTCGAGCGTAACGTGCTTTACC
ATTATCCCTTCATCGGCGATAAGCTGATTATTGGCAAGTTTTGCGCCATTGCCAAAGGTGCGCAATTCATAATGAACGGC
GCCAATCACAAAATGTCCGGCATCTCGACCTACCCGTTTCAAATCTTCGGCAACGGCTGGGAAAAGGTGATGCCGGGCGA
AGGCGATCTGCCCTACAAAGGCGACACGGTGATCGGTAACGATGTGTGGATAGGCTATGAGGCCCTGATCATGCCCGGCG
TTAAGGTAGGTAACGGCGCGATTATCGCTTCCCGTTCCGTCGTCACCTCGGACGTGCCAGCCTACACGGTCGTCGGCGGT
AATCCCGCGAAGCCCGTCCGTGCCCGCTTTGCCCCAGAGGTCGTGGCCCAACTGGAGTCGCTGGCGTGGTGGGACCAATC
ACCGGCATGGATTACTGCGCACCTTGGGCAGATTGTGTCGGGAGACGTGGAGGCGCTGCTGGCGTGCCAGAAGTAG

Protein sequence :
MNGPAPTDPHPLAGFPQVCFIKNTVRNPNIIVGDYTYYDDPLDAENFERNVLYHYPFIGDKLIIGKFCAIAKGAQFIMNG
ANHKMSGISTYPFQIFGNGWEKVMPGEGDLPYKGDTVIGNDVWIGYEALIMPGVKVGNGAIIASRSVVTSDVPAYTVVGG
NPAKPVRARFAPEVVAQLESLAWWDQSPAWITAHLGQIVSGDVEALLACQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 6e-25 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-25 42
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vat YP_003518797.1 Vat NC_002516.2.878374.p Protein 6e-27 49
vat YP_003518797.1 Vat AM180355.1.gene2499. Protein 8e-42 45
vat YP_003518797.1 Vat AY123251.gene2.p01 Protein 2e-25 45
vat YP_003518797.1 Vat JF268688.1.gene6.p01 Protein 6e-27 45
vat YP_003518797.1 Vat AF322577.2.gene4.p01 Protein 5e-26 42
vat YP_003518797.1 Vat AY740681.1.gene5.p01 Protein 5e-26 42
vat YP_003518797.1 Vat NC_011595.7057349.p0 Protein 2e-17 41
vat YP_003518797.1 Vat NC_010410.6000796.p0 Protein 2e-17 41
vat YP_003518797.1 Vat NC_011586.7045146.p0 Protein 2e-17 41