Gene Information

Name : yfeB (PANA_4201)
Accession : YP_003522496.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 4659792 - 4660613 bp
Length : 822 bp
Strand : +
Note : Chelated iron transport system membrane protein YfeB; Similar to Enterobacter sp. 638, ABC transporter related (NCBI: YP_001175844.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane

DNA sequence : 
ATGAACCCCACAATTGTCGTTTCGGACCTCTCGGTAACCTACCGTAACGGGCATACAGCGTTGCACAACGCCAGCTTTAG
CGTGCCAGCCGGGTCAATTGCTGCACTCGTCGGGGTAAATGGTTCGGGTAAATCTACGCTTTTCAAAGCGCTTATGGGAT
TTGTGCCTGCGCGATCGGGCCATATCAGCGTACTGGGATTGCCAACGCGTAAGGCGCTTCGCCGTAGCCTGGTCGCCTAT
GTGCCGCAGGCCGAGGAGGTTGACTGGTCTTTTCCGGTTCTGGTGGATGATGTGGTTATGATGGGGCGCTATGGACATAT
GGGCCTGATGCGTATCCCTAAACGGCAGGATCGCGATCGGGTGACTGACGCGCTGGCACGCGTTGACATGCTGGATTTTC
GCCATCGCCAAATCGGTGAGCTTTCCGGCGGTCAGAAGAAACGCGTTTTCCTTGCGCGGGCCATTGCGCAACAGGGCGAG
GTGATTTTACTGGATGAACCCTTCACCGGCGTTGATGTTCATACCGAGGCCAAAATCATCAGCTTGTTGCGTGAGCTAAA
GGAGGAAGGAAAAACTATGCTGGTTTCGACCCATAATCTTGGCTCCGTGACCGAGTTTTGTGATTACACCGTCATGGTTA
AAGGCACGGTTCTTGCCAGCGGCCCCACGGCGACGACGTTTACGCAGCAGAATCTGGAGCGCACATTCAGTGGCGTACTG
CGCCATGTCATGACTGAGGGCGGTATCACGCAGGTTATCGCCGATCATGAACGTCCGGTTAATGCATCCATGGACACGGA
TTCATCATGGGGTAAACGATGA

Protein sequence : 
MNPTIVVSDLSVTYRNGHTALHNASFSVPAGSIAALVGVNGSGKSTLFKALMGFVPARSGHISVLGLPTRKALRRSLVAY
VPQAEEVDWSFPVLVDDVVMMGRYGHMGLMRIPKRQDRDRVTDALARVDMLDFRHRQIGELSGGQKKRVFLARAIAQQGE
VILLDEPFTGVDVHTEAKIISLLRELKEEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTATTFTQQNLERTFSGVL
RHVMTEGGITQVIADHERPVNASMDTDSSWGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-95 74
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-95 74
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-95 74
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-94 73
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-94 73

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_003522496.1 hypothetical protein BAC0350 Protein 1e-95 74
yfeB YP_003522496.1 hypothetical protein BAC0440 Protein 5e-78 59
yfeB YP_003522496.1 hypothetical protein BAC0400 Protein 8e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeB YP_003522496.1 hypothetical protein VFG0526 Protein 1e-95 74