Gene Information

Name : yfeA (PANA_4200)
Accession : YP_003522495.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 4658878 - 4659795 bp
Length : 918 bp
Strand : +
Note : Periplasmic iron-binding protein YfeA; Similar to Enterobacter sp. 638, periplasmic solute binding protein (NCBI: YP_001175843.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic

DNA sequence : 
ATGACGAACATGGTGAGTAAATTATCGGTTTCAACACTTGGCATGATGTTGAGTGTTTTTATTAGCCTCAACAGCTATGC
GGCTGATAAATTTAAGGTTGTCACGACCTTCACCGTTATTGCTGACATGGCAAAAAATGTGGCAGGGGAGGCGGCTGAGG
TGACGTCAATCACCAAACCTGGTGCCGAAATTCATGAGTATCAACCGACCCCAGGCGATATTAAACGTGCACAGGGTGCA
CAGTTGGTGATGGCTAATGGTTTGAATCTGGAATTGTGGTTTCAACGTTTTTATCAACATCTCAAAGGCGTTCCTGAAGT
TGTTGTTTCAACGGGCGTTTCTCCGATAGGAATAGGGAAGGACCTTATAATGGCAAACCCAATCCTCACGCATGGATGTC
ACCGGATAACGCACTTGATCTATGTGGATAATATTTGTGATGCGCTTGTAAAGCACGATCCGGCCAATGCCAGCACCTAT
CAGCAGAACGCAGCCGCCTATAAGCAAAAGATCGTTGCAGCACTCGAACCTGTTCATAAGCAACTCGCCGCCATACCAGA
AAACAAACGCTGGATAGTGACCAGCGAAGGCGCTTTTTCCTATCTGGCACGTGATTTAGGGCTTAAAGAACTTTATCTCT
GGCCAATCAATGCCGATCAGCAGGGAACGCCACAACAGGTTCGGAACGTCATCGATCAGATGAAAAAGAATGCCATTCCC
GTCATCTTCAGTGAAAGCACCGTCTCCGATAAACCTGCACGCCAGGTCGCGCGCGAAACGCACGCACATTATGGCGGTGT
GTTATACGTTGACTCATTAAGCGCGGCCAACGGGCCTGTGCCAACGTATCTTGACCTGTTGAAAGTTACCACCCAGACGC
TGGTAAACGGCATTCAGGACGGGATGAAAACACCATGA

Protein sequence : 
MTNMVSKLSVSTLGMMLSVFISLNSYAADKFKVVTTFTVIADMAKNVAGEAAEVTSITKPGAEIHEYQPTPGDIKRAQGA
QLVMANGLNLELWFQRFYQHLKGVPEVVVSTGVSPIGIGKDLIMANPILTHGCHRITHLIYVDNICDALVKHDPANASTY
QQNAAAYKQKIVAALEPVHKQLAAIPENKRWIVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQVRNVIDQMKKNAIP
VIFSESTVSDKPARQVARETHAHYGGVLYVDSLSAANGPVPTYLDLLKVTTQTLVNGIQDGMKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-96 69
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-96 69
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-96 69
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-96 69
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-96 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_003522495.1 hypothetical protein BAC0349 Protein 1e-96 69
yfeA YP_003522495.1 hypothetical protein BAC0439 Protein 5e-77 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeA YP_003522495.1 hypothetical protein VFG0525 Protein 1e-96 69