Gene Information

Name : PANA_4150 (PANA_4150)
Accession : YP_003522445.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical Protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 4610809 - 4612356 bp
Length : 1548 bp
Strand : -
Note : Similar to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, hypothetical protein SARI_02733 (NCBI: YP_001571731.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGTTGATGTCTGTAAAAAATGAGAATGCCGCTGGCGGCGAGAATGTGGTGCTTGAACGTCCTGCCGCAGGTGGAGTTTA
TGCGTCCCTGTTTGAAAAAATTAATCTGAACCCGGTTTCTGAGCTGAGTGCGCTGGATATCTGGCAGGATGCACAGGCGA
TGTCGGATGCGACTGCCGATGAACGATTAACTGCCGGCATGCAGGTGTTTATCGAATGCCTGACAAAATCAGGCTCAAAA
GTTGAAAAACTCGACAAGCATCTGATTGACCATCACATCGCGGCGCTGGATGACCAGATTAGTCGTCAGCTTGATGCCGT
TATGCATCACGAGGACTTTCAGGCAGTAGAAAGCCTGTGGCGCGGCGTGAAATCCCTTGTCGACAAAACCGATTTTCGTC
AGAACGTCAAAATTGAACTGCTGGATATGTCTAAAGAAGACCTGCGTCAGGACTTCGAAGACAGCCCCGAAATTATCCAG
AGCGGGCTGTATAAACATACCTATATTGATGAATACGATACGCCGGGTGGCGAGCCGATTGCCGCGCTGATTTCCGCTTA
CGAATTTGATGCGTCTGCGCAGGATGTCGCTCTGCTGCGCAACATTTCGAAAGTGTCTGCCGCTGCGCATATGCCGTTTA
TCGGCTCTGCCGGCCCGACGTTCTTCCTCAAGGACTCCATGGAGGAAGTGGCGGCCATCAAGGATATTGGTAATTACTTT
GATCGCGCGGAATACATCAAGTGGAAATCCTTTCGCGAAACAGACGATTCCCGCTACATCGGTCTGGTCATGCCGCGCGT
ACTGGGCCGCTTACCCTATGGTCCGGACACCGTGCCTGTTCGTAGCTTCAATTACGTGGAAGAAGTGAAAGGCCCGGATC
ATGACAAATACCTGTGGACCAACGCCTCGTTTGCTTTTGCCTCCAATATGGTGCGCAGCTTCATCAATAACGGCTGGTGC
GTGCAAATTCGTGGCCCGCAGGCCGGTGGTGCCGTTCAGGACCTGCCAATCCATCTGTACGATCTGGGTACTGGCAATCA
GGTGAAGATCCCGAGTGAGGTGATGATCCCTGAAACCCGCGAATTTGAATTTGCCAATCTGGGATTCATTCCTTTGTCCT
ATTACCGCAATCGTGACTATGCGTGCTTCTTCTCGGCGAACTCGACCCAGAAACCGGCACTCTATGATACAGCGGATGCA
ACGGCTAACAGCCGTATCAATGCCCGTCTGCCATACATTTTCCTGCTGTCGCGCATTGCGCACTATCTGAAGCTTATTCA
GCGCGAAAACATCGGTACGACGAAAGACCGTCGTCTACTGGAGCTGGAGTTGAACACCTGGGTGCGCAGTCTGGTAACGG
AAATGAGCGATCCGGGTGATGAGCTACAGGCTTCTCACCCACTGCGTGACGCGAAAGTGACAGTGGAAGATATTGAGGAT
AACCCGGGTTTTTTCCGCGTGAAACTGTACGCGATCCCGCACTTCCAGGTAGAGGGCATGGACGTCAACCTGTCACTGGT
TTCTCAGATGCCCAAGGCGAAATCATAA

Protein sequence :
MLMSVKNENAAGGENVVLERPAAGGVYASLFEKINLNPVSELSALDIWQDAQAMSDATADERLTAGMQVFIECLTKSGSK
VEKLDKHLIDHHIAALDDQISRQLDAVMHHEDFQAVESLWRGVKSLVDKTDFRQNVKIELLDMSKEDLRQDFEDSPEIIQ
SGLYKHTYIDEYDTPGGEPIAALISAYEFDASAQDVALLRNISKVSAAAHMPFIGSAGPTFFLKDSMEEVAAIKDIGNYF
DRAEYIKWKSFRETDDSRYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWTNASFAFASNMVRSFINNGWC
VQIRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYRNRDYACFFSANSTQKPALYDTADA
TANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMSDPGDELQASHPLRDAKVTVEDIED
NPGFFRVKLYAIPHFQVEGMDVNLSLVSQMPKAKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-102 45
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 5e-102 45
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 7e-98 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA_4150 YP_003522445.1 hypothetical Protein VFG2475 Protein 8e-111 47
PANA_4150 YP_003522445.1 hypothetical Protein VFG2093 Protein 8e-109 46
PANA_4150 YP_003522445.1 hypothetical Protein VFG2070 Protein 1e-88 45