Gene Information

Name : yfcI (PANA_4113)
Accession : YP_003522408.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 4562280 - 4563224 bp
Length : 945 bp
Strand : -
Note : Transposase; Similar to Salmonella enterica subsp. enterica serovar Choleraesuis, hypothetical protein pKDSC50_p39 (NCBI: NP_073263.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGAAGAAAAAAAACAGTACACCCACGCCTCACGATGCCACCTTCCGCCAGTTTCTTACGCAGCCAGAGATTGCGCGTGA
TTTTATGGAATTGCACCTGCCTGCGGAATTACGGGCCGTGTGCGATCTCAGCACGTTAAAACTCGAATCCGGATCTTTCG
TTGAAGATGATCTACGCCAATATTTCAGCGACGTGTTGTACAGCCTGAAAACCGCACAAGGCGATGACGGCTATGTTCAC
GTCCTGATCGAACATCAGTCCTCACCGGATAAGCACATGGCATTCAGGCTGCTGCGTTATGCCGTGGCGGCGATGCAGCG
CCACCTTGAAGCCGGCCATAAAAAATTGCCGCTGGTCATCCCTGTCTTGTTCTATACCGGGAAACGTCGTCCTTATCCTT
ATTCCACGCGCTGGCTGGATGAATTTACCGATCCTGCGCTGGCCAACCGGCTCTATAGCACGGCTTTTCCGCTGGTGGAT
GTCACGATTATTCCTGACGAGGAGATTGCAGAGCACCGCAGTATGGCCGCGTTAACCCTGCTTCAGAAACATATCCACCA
GCGCGATTTAGCGGAGTTGGTTGATAAGCTTGTCCCGGTCTTACTGGCGGGCTATCTTTCTTCATCACAGGTCGTATCAC
TGATACACTATATCGTGCAGGCGGGAGAAACCGCCGACGCCGAAGCATTGGTAAGAGAACTGGCACATCGCGTGCCGCAA
CACGGAGACGCACTGATGACCATTGCGCAGCAACTCGAACAAAAAGGCATGGAAAAAGGCATGGAAAAAGGCATCCAACT
GGGTCGCGAAGAAGGCCGCTCAGAGGGAGAGCGCGAAGCGACGCTGAAAATCGCCCGTACTATGCTTCAAAGCGGTCTTG
ACCGTGAGACGGTTATGAAGATGACCGGCCTGAGTGAAGACGAACTGGCGCTGATTCGCCACTAA

Protein sequence :
MKKKNSTPTPHDATFRQFLTQPEIARDFMELHLPAELRAVCDLSTLKLESGSFVEDDLRQYFSDVLYSLKTAQGDDGYVH
VLIEHQSSPDKHMAFRLLRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRRPYPYSTRWLDEFTDPALANRLYSTAFPLVD
VTIIPDEEIAEHRSMAALTLLQKHIHQRDLAELVDKLVPVLLAGYLSSSQVVSLIHYIVQAGETADAEALVRELAHRVPQ
HGDALMTIAQQLEQKGMEKGMEKGIQLGREEGRSEGEREATLKIARTMLQSGLDRETVMKMTGLSEDELALIRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 6e-94 60
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-95 60
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 2e-87 60
pilW CAF28495.1 putative transposase Not tested YAPI Protein 3e-96 60
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 9e-65 47