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Name : yjdC (PANA_0394) Accession : YP_003518689.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 466493 - 467071 bp Length : 579 bp Strand : - Note : Putative HTH-type transcriptional regulator YjdC; Similar to Pantoea sp. At-9b, putative transcriptional regulator, TetR family (NCBI: ZP_05730834.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown DNA sequence : TTGCAACGTGAACAGATACTTGACCATGCGTTAAACGTACTGGAACAAAACGGTCTGGCGGCGACCTCATCGCTGGCAAT CCTGGCCGATGATATGCAGCTCAGCCTGACACAGCTTGAACAGTTTTGGCCCGATCGTGACGCGCTGCTCTACGATGCAC TGCAGTTTCACGCCCAGCAGATCGAACAGTGGCGCCATGACATTCTGCAGAACGACGCTCTGCGTCATGATCAGAAGCTG ATGGCACGCTATGAAGGATTAAACGAGCAGGTCAACAAGGGCCGCTTTCCCGGTTGCCTGTTTATCGCCGCCTGCAGTTT TTATCCCCAGCCCGATCAGCCCATCCATCAGTTGGCAGAAAAGCAGAAGCGCGCCTCATGGCAATTTACGCATACCATCT TAACCTCGCTTGGTCTGGATAACCCCAGTATGGTTGCCGATCAAATGGAACTGATACTGGAAGGCTGCCTGAGCAAACTG CTGGTTAAACGCAACGTGCAGGACGTTGATGTGGCGAAACGCCTGGCGGAAGACGTATTGAGTATCGCCCTCTGCCGTAA AAACGGCGCACTGGCCTGA Protein sequence : MQREQILDHALNVLEQNGLAATSSLAILADDMQLSLTQLEQFWPDRDALLYDALQFHAQQIEQWRHDILQNDALRHDQKL MARYEGLNEQVNKGRFPGCLFIAACSFYPQPDQPIHQLAEKQKRASWQFTHTILTSLGLDNPSMVADQMELILEGCLSKL LVKRNVQDVDVAKRLAEDVLSIALCRKNGALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0341 | CAF28570.1 | putative transcription regulator | Not tested | YAPI | Protein | 8e-59 | 59 |
