Gene Information

Name : glnA (PANA_3949)
Accession : YP_003522244.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : GlnA
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 4366413 - 4367828 bp
Length : 1416 bp
Strand : +
Note : Glutamine synthetase; Similar to Pantoea agglomerans, glutamine synthetase (NCBI: AAN37400.1); COG: Amino acid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence : 
TTGAGTATGTCCGCTGAACACGTTCTCTCGATGATGAACGAGCATGAAGTTAAGTTTGTTGACCTGCGTTTTACCGATAC
CAAAGGTAAAGAACAGCACGTTACTATTCCGGCTCACCAGGTTAACGCTGACTTCTTCGAAGAAGGCAAGATGTTCGATG
GCTCTTCCATCGGCGGCTGGAAAGGCATTAACGAATCAGACATGGTGCTGATGCCGGATGCAACCACGGCGGTAATGGAT
CCTTTCTTTGAAGATTCGACCCTGATCATTCGTTGCGACATTCTTGAGCCAGGCACCATGCAGGGCTATGACCGCGATCC
ACGTTCTATCGCCAAGCGCGCGGAAGATTACCTGCGTTCTTCAGGCATTGCGGATACCGTTCTGTTTGGCCCAGAGCCAG
AGTTCTTCCTGTTTGACGATATTCGTTTTGGTTCTTCAACTTCGGGTTCTCATGTTGCTATCGACGATATCGAAGCAGCC
TGGAACACCGGCAAAGAATACGAAGGCGGCAACAAAGGCCACCGTCCAGGCCTGAAAGGCGGTTACTTCCCGGTTCCACC
GGTTGACTCATCACAGGACATCCGTTCTGCCATGTGTCTGACCATGGAGCAAATGGGTCTGGTTGTTGAAGCCCATCACC
ATGAAGTTGCAACAGCAGGTCAGAACGAAGTGGCTACCCGCTTCAATACCATGACCAAAAAAGCTGACGAAATTCAGATC
TACAAATATGTCGTTCACAACGTGGCTCATGCCTACGGCAAAACGGCGACCTTTATGCCAAAACCGATGTTTGGTGATAA
TGGTTCCGGTATGCACTGCCATATGTCGCTGTCTAAAGGCGGTCAGAACCTGTTCTCTGGCGATAAGTACGGCGGCCTGT
CTGAAATGGCGCTGTTCTACATTGGCGGCATCATCAAGCATGCTAAAGCTATTAACGCCCTGGCGAACCCAACCACCAAC
TCCTACAAGCGTCTGGTGCCGGGTTATGAAGCGCCGGTGATGCTGGCCTATTCAGCGCGTAACCGTTCAGCCTCAATCCG
TATCCCGGTTGTTGCCAGCCCGAAAGCACGTCGTATTGAAGCGCGCTTCCCGGATCCAGCGGCTAACCCATACCTGGCGT
TTACCGCACTGCTGATGGCGGGTCTTGATGGCATCATCAACAAGATCCATCCTGGCGATGCGATGGACAAAAACCTGTAT
GACCTGCCACCGGAAGAAGAAGCTGAAATTCCAAAAGTTGCAGGTTCACTGGAAGAAGCGCTGATTGCCCTGAACGAAGA
CCGCGAGTTCCTGACCCGTGGCGGCGTGTTCACTGATGACGCGATCGATGCCTATATCGAACTGCGTAAATCCGAAAACG
ATCGTGTGCGCATGACGCCGCACCCGGTTGAGTTCGAACTGTACTACAGCGTTTAA

Protein sequence : 
MSMSAEHVLSMMNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDATTAVMD
PFFEDSTLIIRCDILEPGTMQGYDRDPRSIAKRAEDYLRSSGIADTVLFGPEPEFFLFDDIRFGSSTSGSHVAIDDIEAA
WNTGKEYEGGNKGHRPGLKGGYFPVPPVDSSQDIRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQI
YKYVVHNVAHAYGKTATFMPKPMFGDNGSGMHCHMSLSKGGQNLFSGDKYGGLSEMALFYIGGIIKHAKAINALANPTTN
SYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLAFTALLMAGLDGIINKIHPGDAMDKNLY
DLPPEEEAEIPKVAGSLEEALIALNEDREFLTRGGVFTDDAIDAYIELRKSENDRVRMTPHPVEFELYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 7e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003522244.1 GlnA VFG1399 Protein 1e-113 50