Gene Information

Name : rph (PANA_3909)
Accession : YP_003522204.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : Rph
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : -
Position : 4327343 - 4328059 bp
Length : 717 bp
Strand : -
Note : Ribonuclease PH; Similar to Yersinia aldovae ATCC 35236, Ribonuclease PH (NCBI: ZP_04621595.1); COG: Translation, ribosomal structure and biogenesis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGCGTCCAGCAGGCCGTAGCGCACATCAGGTGCGTCCAGTCACATTGACCCGCAATTACACTAAACACGCAGAAGGTTC
CGTTCTGGTGGAATTCGGTGAAACCAAAGTGCTCTGCACTGCCACGGTGGATGAAGGTGTTCCGCGCTTCCTCAAAGGAC
AGGGACAGGGCTGGGTCACTGCCGAATATGGCATGTTGCCGCGTTCAACGCATAGCCGCATGGCACGTGAAGCCGCGAAA
GGCAAACAGGGCGGCCGCACGCTGGAAATTCAGCGTCTGATCGCCCGTTCACTCCGCGCAGCCGTCGATCTTAAAGTGCT
GGGTGAATATACCATTACGCTTGATTGCGACGTCATCCAGGCTGATGGTGGCACCCGTACCGCATCTATCACCGGCGCCT
GCGTGGCACTGGCGGATGCACTAAACAAACTGGTTGCCAGCGGTAAGCTCAAAGCGAACCCGATGAAAGGGATGGTCGCG
GCGGTATCTGTGGGCATTGTTAACGGTGAAGCCCTGTGTGACCTTGAATATGTTGAAGACTCCGCAGCTGAAACCGATAT
GAACGTCGTGATGATGGAAGACGGCCGTATGATCGAGGTGCAGGGCACGGCGGAAGGCGAACCTTTCAGCCATGAAGAGT
TGCTGGCACTGCTGGCGCTGGCCCGCGGCGGCATCGAAGAGTTAATTCAGGCGCAAAAAGCGGCGTTGGAAAAATAA

Protein sequence :
MRPAGRSAHQVRPVTLTRNYTKHAEGSVLVEFGETKVLCTATVDEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMAREAAK
GKQGGRTLEIQRLIARSLRAAVDLKVLGEYTITLDCDVIQADGGTRTASITGACVALADALNKLVASGKLKANPMKGMVA
AVSVGIVNGEALCDLEYVEDSAAETDMNVVMMEDGRMIEVQGTAEGEPFSHEELLALLALARGGIEELIQAQKAALEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-60 58