Gene Information

Name : xylA (PANA_0039)
Accession : YP_003518334.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : XylA
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 41045 - 42367 bp
Length : 1323 bp
Strand : -
Note : Xylose isomerase; Similar to Pantoea sp. At-9b, xylose isomerase (NCBI: ZP_05729685.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGCACGCTTATTTTGACCAGCTTGATCGCGTTCGCTACGAAGGAACAAAAACCACCAATCCTCTGGCGTTCCGCCACTA
CAATCCGGATGAAGTGATCATGGGTAAAACCATGGCCGAGCATCTGCGCTTCGCCGCCTGTTACTGGCATACGTTCTGCT
GGAACGGTGCCGATATGTTTGGCGCGGGTGCGTTTGATCGTCCGTGGCAGAAAGCGGGCGAGGCGCTGGATCTGGCCAAA
CTCAAAGCGGACGTGGCGTTCGAGTTTTTTTACAAGCTGAACGTGCCCTATTACTGCTTCCACGATGTGGACGTGTCACC
GGAAGGGGATTCGCTGAAAAGCTATCGCGAAAACCTGGCCGTCATGACCGATAAACTGCTGGAAAAGCAGCTGGAAACCG
GGCTTAAGCTGCTGTGGGGCACAGCGAACTGCTTCACCCATCCGCGTTATGGTGCAGGCGCTGCAACCAGTCCCGATCCG
GAGGTGTTTTCCTGGGCAGCCAGCCAGGTATGCAGTGCCATGAAAGCCACCCAGACGCTGGGCGGCGAAAACTATGTGCT
GTGGGGCGGTCGCGAAGGATACGAAACCCTGTTAAATACCGACCTGCGCCAGGAGCGCGAGCAGATCGGCCGCTTTATGC
AAATGGTGGTGGAGCACAAGCACAAAATCGGCTTCCAGGGCACGCTGCTGATCGAACCTAAGCCGCAGGAACCCACCAAG
CATCAGTATGATTATGATGTCGCCACGGTTTATGGCTTCCTGAAGCAGTTTGGTCTGGAAAAAGAGATTAAGGTGAACGT
CGAAGCGAACCATGCGACGCTGGCTGGCCACGCTTTCCATCATGAAATTGCAACGGCCATTGCCCTTGGCGTGTTTGGTT
CGGTGGATGCTAACCGTGGTGATCCGCAGTGCGGCTGGGATACGGACCAGTTCCCGGTCAGCGTGGAAGAAAACGCGCTG
GTGATGTACGAAATCATCAAAGCAGGCGGTTTCACGACCGGCGGCCTAAACTTTGATGCCAAAGTGCGCCGTCAGAGCAC
CGATAAGTATGACCTGTTCCATGGACATATCGGCGCGATGGATACCATGGCACTGGCGTTGAAAGTCGCGGCTCGCATGC
TGTCTGACGGTGAGCTGGATAAACGCGTTGCGCAGCGCTACAGCGGCTGGAACGGTGAGTTCGGTCAGCAGATTTTGAAA
GGCGAGTTCTCTCTGGACGCGCTGGCGGCCCATGCGCATCAGCAGCAGTTTAACCCGCAGCACAACAGTGGACGTCAGGA
GCAGCTGGAAAACCTGGTGAATCACTATCTCTATGATTTTTAA

Protein sequence :
MHAYFDQLDRVRYEGTKTTNPLAFRHYNPDEVIMGKTMAEHLRFAACYWHTFCWNGADMFGAGAFDRPWQKAGEALDLAK
LKADVAFEFFYKLNVPYYCFHDVDVSPEGDSLKSYRENLAVMTDKLLEKQLETGLKLLWGTANCFTHPRYGAGAATSPDP
EVFSWAASQVCSAMKATQTLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK
HQYDYDVATVYGFLKQFGLEKEIKVNVEANHATLAGHAFHHEIATAIALGVFGSVDANRGDPQCGWDTDQFPVSVEENAL
VMYEIIKAGGFTTGGLNFDAKVRRQSTDKYDLFHGHIGAMDTMALALKVAARMLSDGELDKRVAQRYSGWNGEFGQQILK
GEFSLDALAAHAHQQQFNPQHNSGRQEQLENLVNHYLYDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-96 49
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 8e-97 49