|
Name : yhgF (PANA_3685) Accession : YP_003521980.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 4072167 - 4074491 bp Length : 2325 bp Strand : + Note : Protein YhgF; Similar to Pantoea sp. At-9b, RNA binding S1 domain protein (NCBI: ZP_05731110.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : ATGATGAATGTTCTTAGCCAGCTAATTGCAAGTGAGCTACAGGCGCGCCCTGAGCAAGTCGATGCGGCCGTCCGCCTGTT GGATGAAGGGAATACCGTGCCGTTTATCGCACGTTATCGCAAAGAGGTGACGGGCGGCCTGGATGATACCCAACTCCGCC AGCTCGAAACCCGCCTCAGCTACCTGCGTGAATTATCCGAGCGTCGGCAGGCCATCCTGAAATCTATTGAAGAACAGGGA AAACTCACCGACGACCTGGCGAATGCCATCAATACCACCCTCAGCAAAACCGAACTTGAAGACCTCTACCTGCCCTATAA GCCTAAGCGCCGTACGCGTGGCCAAATCGCGATTGAAGCCGGGCTGGAACCCCTGGCCGATACCTTATGGCAGGATCCTT CGCAGGACCCTGAGCAGCTGGCAACAGGTTATGTGAATGTGGATAACGGCGTCGCTGACGTTCGTGCGGCGCTGGATGGC GCGCGTTATATCCTGATGGAGCGCTTTGCTGAAGATGCCGCCCTGCTGGCTAAAGTCCGCCACTATTTGTGGAAAAATGC CCATCTGGTCTCAAACGTGGTGGAAGGCAAAGAGGAAGAAGGCGCGAAATTCCGCGACTACTTCGATCACCATGAGCCGC TGCACAGCGTCCCTTCGCATCGCGCGCTGGCCATGCTGCGCGGTCGTAATGAAGGTATTTTACAGCTGTCGCTGAATGCC GACCCGCAGTTTGATGAGCCACCGCGCGAAAGCCACGGTGAAACCCTGATTGCGGAACACCTGAATCTGCGACTGAATAA CGCACCGGCTGACAGCTGGCGCAAGGCCGTGGTCAGTTGGACCTGGCGCATCAAAGTCATGCTGCATCTGGAAACCGAGC TGATGGGTACCGTTCGCGAGCGTGCGGAAGACGAGGCCATTAACGTCTTTGCCCGTAACCTGCACGACCTGTTAATGGCG GCACCTGCGGGCATGAGGGCCACGATGGGCCTGGATCCCGGCCTGCGTACCGGTGTGAAAGTTGCCGTGGTTGACGCGAC CGGCAAGCTGGTCGCCACCGATACAGTTTATCCGCATACCGGGCAAACGGCCAAGGCGGCGGCAGCGGTCGCGGCGCTGT GCGTGAAACATCAGGTGGAACTGGTCGCCATCGGTAATGGCACCGCCTCACGTGAAACCGAGCGCTTCTTTCTGGATCTG CAAAAACAGTTTCCCCAGGTCACCGCCCAGAAAGTGATCGTCAGCGAAGCGGGCGCCTCAGTCTACTCCGCGTCTGAATT AGCTGCGCTGGAATTTCCGGATCTGGATGTCTCACTGCGTGGCGCAGTGTCGATCGCCCGTCGCCTGCAGGATCCACTGG CCGAACTGGTGAAAATCGATCCGAAATCGATCGGTGTCGGCCAGTATCAGCATGACGTCAGCCAGAGCCAGCTAGCGAAA AAACTGGATGCGGTGGTGGAAGACTGTGTGAACGCTGTCGGTGTCGATCTCAACACGGCTTCGGTACCGCTGCTGACGCG CGTGGCCGGGTTAACCCGCATGATGGCACAAAATATTGTTGGCTGGCGCGATGAAAACGGCCGTTTCCAGAACCGTCAGC AGCTTCTCAAGGTCAGCCGTCTTGGGCCTAAAGCGTTTGAGCAGTGCGCTGGCTTCCTGCGCATCAACCACGGCGATAAT CCACTGGATGCCTCGACGGTGCACCCGGAAGCTTATCCGGTGGTGGAACGCATTCTGGCCGCGACCGAGCAGGCGCTGAG TGAGCTGATGGGTAATCCCACCAGCCTGCGTAACCTGAAAGCGTTGGACTTCACAGACGACCGCTTTGGTTTACCGACTG TGACCGACATCATGAAAGAGCTGGAAAAGCCGGGCCGCGATCCCCGTCCTGAGTTTAAAACGGCACAGTTTGCCGAAGGC GTGGAAACCCTGAATGACCTGATGCCAGGCATGGTGCTTGAAGGCGCCGTGACCAACGTCACCAACTTTGGTGCGTTCAT TGATATTGGCGTGCATCAGGATGGCCTGGTTCATATTTCTTCGCTGTCGGACAAGTTTGTGGAAGATCCGCATCAGGTCG TGAAAGCGGGCGACATCGTTAAAGTTAAAGTGATGGAAGTGGATCTGCAACGTAAGCGCATTGCCTTAACCATGCGCCTT GACGAGCAGCCGGGAGAAGGCAACGCGCGTGGCGCTAAGAGCAGTGCGCCACGCGAAGAAAAACGTCCGGCCGCGAACAA AGGCCGCGCACGTCCTGCCAGCCAGCCCGCAGGCAACAGCGCCATGGGCGACGCGCTGGCGGCGGCATTCGGTAAAAAAC GCTAG Protein sequence : MMNVLSQLIASELQARPEQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLSYLRELSERRQAILKSIEEQG KLTDDLANAINTTLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADTLWQDPSQDPEQLATGYVNVDNGVADVRAALDG ARYILMERFAEDAALLAKVRHYLWKNAHLVSNVVEGKEEEGAKFRDYFDHHEPLHSVPSHRALAMLRGRNEGILQLSLNA DPQFDEPPRESHGETLIAEHLNLRLNNAPADSWRKAVVSWTWRIKVMLHLETELMGTVRERAEDEAINVFARNLHDLLMA APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHTGQTAKAAAAVAALCVKHQVELVAIGNGTASRETERFFLDL QKQFPQVTAQKVIVSEAGASVYSASELAALEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVGWRDENGRFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN PLDASTVHPEAYPVVERILAATEQALSELMGNPTSLRNLKALDFTDDRFGLPTVTDIMKELEKPGRDPRPEFKTAQFAEG VETLNDLMPGMVLEGAVTNVTNFGAFIDIGVHQDGLVHISSLSDKFVEDPHQVVKAGDIVKVKVMEVDLQRKRIALTMRL DEQPGEGNARGAKSSAPREEKRPAANKGRARPASQPAGNSAMGDALAAAFGKKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
