Gene Information

Name : iucB (PANA_0350)
Accession : YP_003518645.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : IucB
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 421172 - 422119 bp
Length : 948 bp
Strand : +
Note : Aerobactin siderophore biosynthesis protein IucB; Similar to Pectobacterium wasabiae WPP163, Siderophore biosynthesis protein, conserved region (NCBI: YP_003258373.1); COG: Inorganic ion transport and metabolism; Subcellular localization as predicted by P

DNA sequence :
ATGTCTCAGGCAACGATTGTTCACAGCGGCCACGGCCTGCGTTGCGAAAAGTCAGGAAAAACCCTGAATCTGGGTTGGGG
ACAGGACAACAGTGCGGTGCTGCATTTTGCCGGTCCACTGCCCGAAGGCTGGCTGCGTGATGCGCTGGATCAGATGTTTA
TCGCTGCCCCGCAGCTTTCTGCCGTGGTGCTGCCCTTCGCAGAGTGGCGTGAAGAGCCTCAGGCGCTGGCGCTGTTTGCG
GCACTGAAAAGCGATATCGTCCACCGCGAGACGTTCTGGCAACTGCCGCTGTGGTTGTCTGCGCCTCGTCAGCAGGCCTC
CGGCGAGATGGTATTTGATGCCGAACGTGAGATCTATTTTCCCCAGCGCCCAGCGCGACCTGATGGCGAAGTGTATCGCC
GTTACGATCCGCGCGTACGGCGAACGCTGAGCTTCCGCGTGGCCGATCCTGCCCGGGATGCCGAAGCGTTTACCCGCTGG
ATGAACGATCCGCGCGTGGATTACTTCTGGGAGCAGAGCGGATCGCTGGCCACTCAGACCGCCTATCTTGAACGCCAGCT
CGGCAGCAGCTATGCCTTTCCGCTGATTGGCTGTTTTGATGACAAGCCCTTCAGCTACTTTGAAATTTACTGGGCGGCGG
AAGATCGTATCGGACGGCACTACAGCTGGCAGCCGTACGATCGCGGTTTGCATCTGCTGGTGGGGGAGCCGCAGTGGCGC
GGGCCGCACTTTGTGCAGAGCTGGCTGCGCGGCATCAGCCACTATCTGCTGCTGGATAATCCGCAAACTCAGCGCCTGGT
GCTGGAACCACGGGCGGATAATCAGCGCCTGTTTCGTCACCTTGAACCCGCGGGCTATACCACCGTGAAAGAGTTCGACT
TTCCGCACAAGCGCTCTCGCCTGGTGATGACCCAGCGCGCCCGTTTCTTCAGCGAGGTGGGCCTGTGA

Protein sequence :
MSQATIVHSGHGLRCEKSGKTLNLGWGQDNSAVLHFAGPLPEGWLRDALDQMFIAAPQLSAVVLPFAEWREEPQALALFA
ALKSDIVHRETFWQLPLWLSAPRQQASGEMVFDAEREIYFPQRPARPDGEVYRRYDPRVRRTLSFRVADPARDAEAFTRW
MNDPRVDYFWEQSGSLATQTAYLERQLGSSYAFPLIGCFDDKPFSYFEIYWAAEDRIGRHYSWQPYDRGLHLLVGEPQWR
GPHFVQSWLRGISHYLLLDNPQTQRLVLEPRADNQRLFRHLEPAGYTTVKEFDFPHKRSRLVMTQRARFFSEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 2e-125 81
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 2e-125 81
iucB AAK71632.1 IucB Virulence SHI-3 Protein 1e-125 81
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 9e-125 80
iucB AAD44747.1 IucB Virulence SHI-2 Protein 1e-125 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucB YP_003518645.1 IucB VFG0616 Protein 7e-126 81
iucB YP_003518645.1 IucB VFG1082 Protein 7e-126 81
iucB YP_003518645.1 IucB VFG0939 Protein 4e-125 80