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Name : gabD (PANA_3555) Accession : YP_003521850.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : GabD Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3954147 - 3955625 bp Length : 1479 bp Strand : - Note : Succinate-semialdehyde dehydrogenase [NADP+]; Similar to Enterobacter sp. 638, succinate semialdehyde dehydrogenase (NCBI: YP_001178384.1); COG: Energy production and conversion; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : ATGACAAACCGACAGGAGCACCTAATGCATTCTTCACTGCACGACAGCGAACTGTTCCAGACAGGCTATCTGGTAAACGG GCAATGGCTGCGTACCACGTCTACCTTTGACGTGACGAATCCTGCCACGGGCGAGGTCGTCGCTCAGGTGGCAAAAGCAG GAAAAACGGAAACGGAAGCTGCAATAAAGGCTGCCCAGGATGCTTTCCCAGCGTGGCGAGCACAGACCGCCAAGGGGCGT TCAGAACTGCTGTACCGCTGGTATAGGTTAATCATTGAACACAAACGCTGGCTGGCTGAGTTAATGACAACGGAGCAAGG CAAGCCGCTCAAGGAAGCAGAAGGCGAAGTGGAATATGCCGCCAGCTTTATTCAATGGTTCGCCGAGCAGGCTAAACGGG CTAACGGTGAAATCATCCCTCCTGCTAAAGCGGGCTCGCGCATTCTGGCAACCCGTGAGCCGGTCGGCGTCGTCGCCGCT ATCACGCCCTGGAATTTCCCTATGGCGATGCTGACACGTAAGTTAGGCCCGGCGCTGGCAGCGGGATGTACAGGCATTAT TAAACCCGCGAATAACACACCGCTTTCCGCATTTGCCTTACTGGCGCTGGCAAAAAAAGCCGGCATCCCTGATGGCGTGC TTAACGGTGTAGCAGGCGACACGCATGCCATTAGCGATGCCATTATGGCCAGCAAAGCCGTACGTAAAATTTCCTTTACC GGTTCCACGGCAGTGGGGAAAACGCTAATGCGTAACGCTGCTGAAACCATGAAAAAGGTTTCGATGGAACTGGGCGGTAA TGCGCCCTATATCGTCTTTGAAGATGCAGATATCGATGCAGCCGTGCAGGGAGCCATCGCCAATAAATTCCGCAATGCCG GTCAGGTTTGTGTCAGCGTTAACCGCTTTTTCATTCACAGTGCAGTTTACGAACGTTTTACGACCCAACTGGCCGCTGAA GTGGATAAACTTAGCGTCGGAAACGGCATGGATAATGGCGTGGTCGTCGGCCCGTTAATCGAATCATCCGCATTAGAAAA AGTCGAAGAGCATGTCAAAGATGCCATTGCTCAGGGTGGAAAAGTGCTGACGGGTGGTCAGCGACACGCGCTGGGCGGTA ATTTTTGGCAGCCAACGGTCATTGTTGAGGCACATGAAGGCATGAAACTGGCTCAGGAAGAAACGTTTGGCCCGGTGGCA GCCTGTTTCCGCTTTGATGACGAAGAAGAGGTTATCCGTCGTGCCAACCAGACGGAATACGGGCTGGCGGCGTATTTTTA TACGCAAAACCTGCAGCGGGTATTCCGGGTCTCTGCCGCGCTCGAAAGTGGAATGATTGGCATCAATGAGTGTGCGGTCT CGACAGAGTTGGCCCCCTTTGGCGGCGTGAAAGAGTCTGGTCTGGGACGTGAAGGATCGGTACTGGGGATGGATGAGTAC CTGGAGGTCAAAGCGCTGCACCTCGGCGGGTTAAGTTAG Protein sequence : MTNRQEHLMHSSLHDSELFQTGYLVNGQWLRTTSTFDVTNPATGEVVAQVAKAGKTETEAAIKAAQDAFPAWRAQTAKGR SELLYRWYRLIIEHKRWLAELMTTEQGKPLKEAEGEVEYAASFIQWFAEQAKRANGEIIPPAKAGSRILATREPVGVVAA ITPWNFPMAMLTRKLGPALAAGCTGIIKPANNTPLSAFALLALAKKAGIPDGVLNGVAGDTHAISDAIMASKAVRKISFT GSTAVGKTLMRNAAETMKKVSMELGGNAPYIVFEDADIDAAVQGAIANKFRNAGQVCVSVNRFFIHSAVYERFTTQLAAE VDKLSVGNGMDNGVVVGPLIESSALEKVEEHVKDAIAQGGKVLTGGQRHALGGNFWQPTVIVEAHEGMKLAQEETFGPVA ACFRFDDEEEVIRRANQTEYGLAAYFYTQNLQRVFRVSAALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGMDEY LEVKALHLGGLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-132 | 57 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-79 | 41 |
