Gene Information

Name : CP80 (PANA_3419)
Accession : YP_003521714.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : CP80
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 3805968 - 3806195 bp
Length : 228 bp
Strand : -
Note : hypothetical 8.5 kDa protein in gpA 5'region; Similar to Pantoea sp. At-9b, transcriptional regulator, TraR/DksA family (NCBI: ZP_05728635.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGGCAGATGCAATCGATATTGCGCAGCAGCGCAGCGAGGAAATCCTGGCGCAAAATATCGCGCAGGTTACGCAACGTCC
TGTGGCGATCGGCGCCTCGTTCTGTGAAGAGTGCGACGCACCGATTCCTGAAGCGCGCCGTCGTGCGCTGCAGGGCGTGA
CCCGCTGCCTCTCCTGTCAGGAGTTGAGCGAGCTGAGAGCACGTCTTCACTACGGGAATACGCGATGA

Protein sequence :
MADAIDIAQQRSEEILAQNIAQVTQRPVAIGASFCEECDAPIPEARRRALQGVTRCLSCQELSELRARLHYGNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13500.1 hypothetical protein Not tested PAGI-6 Protein 2e-07 47
STY4638 NP_458718.1 hypothetical protein Not tested SPI-7 Protein 3e-11 44
t4331 NP_807925.1 hypothetical protein Not tested SPI-7 Protein 3e-11 44
unnamed CAA21401.1 - Not tested HPI Protein 4e-04 41
unnamed CAB46597.1 hypothetical protein Not tested HPI Protein 3e-04 41
y2408 NP_669715.1 hypothetical protein Not tested HPI Protein 4e-04 41
YPTB1587 YP_070115.1 hypothetical protein Not tested HPI Protein 4e-04 41