Gene Information

Name : sgaT (PANA_3228)
Accession : YP_003521523.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : SgaT
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 3601881 - 3603257 bp
Length : 1377 bp
Strand : +
Note : Putative transport protein SgaT; Similar to Pectobacterium wasabiae WPP163, putative sugar-specific permease SgaT/UlaA (NCBI: YP_003258206.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane

DNA sequence :
ATGTTTATACAAAACCTTTTACTGGTAGTTGTCGACGTGCTGAAGGTCCCCTCTATTCTGGTCGGGCTGGTCGCCATGTT
CGGTCTGATAGCGCAACGTAAACCGCTGCCGGATGTGATAAAGGGTACGGTAAAAACCATCCTGGGTTTTTTAGTACTGG
CAGGCGGTGCCACTGTGTTAGTGGGATCGCTGACGCCGCTGGGGGATATTTTCAAACACGCGTTCAACGTCCAGGGCATT
ATTCCCAATAACGAGGCTATGGTTTCCATCGCCCTGGCGAAGTATGGTGCGCCCACGACGCTGATTATGGCCTTCGGCAT
GGTGGCCAATATTACCGTCGCCCGCTTTACGCGTCTGAAATATATCTACCTCTCTGGTCATGTCACTTTTTATATGGCCT
GCATGATCGCGATTATTCTCTCGGTGGCGGGTTTCGAGGGCGTGCAGCTTATCTATACTGGCTCGCTGACGCTGGGCATG
TTAATGGCCTTTTTCCCGGCACTGGCACAGCCCTACATGCGTAAAATCATTGGGCACGATCAGGTCGCGCTGGCGCACAC
CGGTACGGTTGGCTATGTCCTGTCGGGCTGGATAGGTTCTCTGGTGGGCAAAGGTTCTAAATCCACCGAAGAGATGAACA
TGCCAAAAAACCTGAGTTTTTTGCGTGACAGCACCATCTCTATTTCCCTGACGATGATGGTCATCTATTTTATTTTGTCC
ATTTCGGCAGGCAGAGAATACGTGGAGAGTCAGTTCAGCCACGGGCAAAACTATCTGGTGTACTCCTTTGTGCAGGCCAT
TACCTTCGCTGCCGGTGTTTTTATTATCCTCCAGGGCGTGCGTTTGATTCTGGCCGAAATTGTGCCGGCGTTTACCGGGT
TTTCAGAGAAGTTGGTGCCAAGCGCGCGTCCGGCACTCGACTGCCCTATTGTATTCCCCTATGCGCCTAACGCCGTTCTG
GTCGGTTTTATTTCCAGCTTTATCGGCGGCCTGGTCGGGCTGTTTATTCTGGGGCAGCTGCACTGGATATTAATTCTGCC
TGGCGTGGTACCGCACTTTTTCTGCGGCGCAACCGCAGGCGTTTTTGGTAATGCTACCGGCGGGAAACGCGGGGCCATGT
TAGGTGCCTTTGCCCACGGTATTCTGATTACCTTCCTCCCGGTCGCCTTATTGCCTGTCCTGGGCGCCATCGGCCTGACG
AATACCACCTTCTCAGACACCGACTTCGGCGTCACGGGGATTCTGTTGGGGAATATGGCCAGATTCCTTGATAAAGGGAC
CATTACCATGGTGATCACTGGAATTTTTGCCCTGCTGGTTATCTATAACTATGTCGCCCGTAGCAAAACGGTCGTCAAAG
AGGCCAATAACGATTGA

Protein sequence :
MFIQNLLLVVVDVLKVPSILVGLVAMFGLIAQRKPLPDVIKGTVKTILGFLVLAGGATVLVGSLTPLGDIFKHAFNVQGI
IPNNEAMVSIALAKYGAPTTLIMAFGMVANITVARFTRLKYIYLSGHVTFYMACMIAIILSVAGFEGVQLIYTGSLTLGM
LMAFFPALAQPYMRKIIGHDQVALAHTGTVGYVLSGWIGSLVGKGSKSTEEMNMPKNLSFLRDSTISISLTMMVIYFILS
ISAGREYVESQFSHGQNYLVYSFVQAITFAAGVFIILQGVRLILAEIVPAFTGFSEKLVPSARPALDCPIVFPYAPNAVL
VGFISSFIGGLVGLFILGQLHWILILPGVVPHFFCGATAGVFGNATGGKRGAMLGAFAHGILITFLPVALLPVLGAIGLT
NTTFSDTDFGVTGILLGNMARFLDKGTITMVITGIFALLVIYNYVARSKTVVKEANND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 1e-108 60
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 1e-108 60
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 1e-108 60