Gene Information

Name : qseB (PANA_0308)
Accession : YP_003518603.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 375066 - 375752 bp
Length : 687 bp
Strand : -
Note : Transcriptional regulatory protein QseB; Similar to Pantoea sp. At-9b, two component transcriptional regulator, winged helix family (NCBI: ZP_05732326.1); COG: Signal transduction mechanisms; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence : 
TTGCCATTTTTCGGGAGGGCATCATCCATGCGCGTTTTGTTGGTCGAAGATGATGAAATGATCGGCGCGAATTTGCAGCA
GGCGCTGGAAGCGGCAGGCTGGTCAGTTGACTGGGTACGCGATGGCGTGTATGCGCAAAACGCCTGGAGCGAAGGCGGCT
ACAGCTGCGTCCTGCTTGATCTTGGCTTACCCCGGGACGACGGATTGCAGGTGCTGAGACGGGCACGCGGGCGCGGGGAT
GCCACACCGGTCTTGATCCTTACCGCCCGCGATACGGTCGCTCAGCGCGTACAGGGCCTGGATTATGGTGCGGATGACTA
CCTGCTTAAGCCTTTTGATCTTCAGGAGGTCATGGCCCGCATGCGTGCGATTACCCGGCGCCATCACGGTTCCGCCGATT
CGGTGCTGGGCAGCGGGGATGTTCAACTGGATATGCTGACGCGCGAAGTCCTGTACAAAGGGCAACGTGAGCAGTTAACC
GCCCGGGAATATGCCCTGCTCTATGCGCTGCTGGAGCGGCCCGGTGCCATCCTGTCACGCGAGCAGTTAGAGAACCGCAT
CTATGGCTGGGGCGAAGAAGTCAGCAGCAATGCAGTAGACGTATTAATCCACGGCATGCGGCGCAAGCTGGATAATGATG
TGATCCGCAACGTGCGCGGACTGGGTTGGCGAGTACCGGCAATATGA

Protein sequence : 
MPFFGRASSMRVLLVEDDEMIGANLQQALEAAGWSVDWVRDGVYAQNAWSEGGYSCVLLDLGLPRDDGLQVLRRARGRGD
ATPVLILTARDTVAQRVQGLDYGADDYLLKPFDLQEVMARMRAITRRHHGSADSVLGSGDVQLDMLTREVLYKGQREQLT
AREYALLYALLERPGAILSREQLENRIYGWGEEVSSNAVDVLIHGMRRKLDNDVIRNVRGLGWRVPAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003518603.1 QseB BAC0197 Protein 1e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_003518603.1 QseB VFG0473 Protein 2e-26 45
qseB YP_003518603.1 QseB VFG1390 Protein 5e-21 42