Gene Information

Name : PANA_3159 (PANA_3159)
Accession : YP_003521454.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical Protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 3537727 - 3538776 bp
Length : 1050 bp
Strand : +
Note : Capsid Portal Protein; Similar to Erwinia tasmaniensis Et1/99, Probable capsid portal protein (NCBI: YP_001906513.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGAGCAGACGCAGGAACCGCACGCGCACGCAGCCCGTGCAGCAGCCGGAACAGATGACCAGCACCGCCGCCTCAGAGGC
ATTTACCTTTGGCGACCCGATCCCGGTACTCGACCGCCGCGAACTGCTGGACTACGTGGAGTGCGTCATCAATGACCGCT
GGTATGAGCCGCCCGTAAGCGTTGATGGGCTGGCGCGCACGTTCCGCGCCGCCGTTCATCACAGCTCACCCATCAGTGTT
AAGTGCAACATTCTGGCGAGTACCTTTATCCCGCACCCGCTTTTGAGCCAGCAGGCTTTTACCCGCTTTGCGATGGATTA
CCTGGTCTTTGCCAACGCGTACCTGGAGAAGCGAACCAGCCGCCTCGGCACCACGCTGAAACTTGAGCCATCGCTTGCCA
AATACACGCGGCGCGGGCTTGACCTGGACACGTACTGGTATGCGCATTACGGCCTCAACACGGAGCCGTATAAATTTACA
AAGGGCAGCGTGTTTCACCTGATGGAGCCGGACATCAATCAGGAAATCTACGGCGTGCCGGGCTACCTGTCGGCTGTTCC
TTCTGCGCTGCTGAATGAGTCGGCCACGCTGTTTCGCCGCAAGTATTACATTAACGGCAGCCACGCCGGTTTTATCATGT
ACATGACCGACCCGGCGCAGAGCCAGCAGGATGTTGATAACATCCGCAGCGCAATGAAAAGCGCAAAGGGCCCTGGCAAC
TTCCGCAACCTGTTTATGTACAGTCCGAACGGGAAGAAAGACGGCATTCAGATCATCCCGCTGTCAGAGGTGGCGGCCAA
AGATGAGTTTTTGAATATCAAAAACGTGTCGCGCGATGACATGCTGGCCGTGCATCGCGTGCCGCCTCAGTTAATGGGTA
TTATCCCCAACAACACCGGCGGGTTTGGTGACATTGAAAAGGCCAGCCGCGTGTTTGTGCGAAACGAACTTATCCCGCTG
CAGGCGCGCATGAAAGAGTTAAATGAATGGCTCGGCCAGGAGGTCATCAGGTTTGCGCCTTACAACCTCGATCTGGAAGA
TGGCAACTGA

Protein sequence :
MSRRRNRTRTQPVQQPEQMTSTAASEAFTFGDPIPVLDRRELLDYVECVINDRWYEPPVSVDGLARTFRAAVHHSSPISV
KCNILASTFIPHPLLSQQAFTRFAMDYLVFANAYLEKRTSRLGTTLKLEPSLAKYTRRGLDLDTYWYAHYGLNTEPYKFT
KGSVFHLMEPDINQEIYGVPGYLSAVPSALLNESATLFRRKYYINGSHAGFIMYMTDPAQSQQDVDNIRSAMKSAKGPGN
FRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMLAVHRVPPQLMGIIPNNTGGFGDIEKASRVFVRNELIPL
QARMKELNEWLGQEVIRFAPYNLDLEDGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 4e-142 82
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 4e-142 82
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 1e-93 58