Gene Information

Name : O (PANA_3157)
Accession : YP_003521452.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : O
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3534953 - 3535915 bp
Length : 963 bp
Strand : -
Note : Presumed capsid scaffolding protein; Similar to Erwinia tasmaniensis Et1/99, Putative capsid scaffolding protein (NCBI: YP_001906515.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
TTGTGTGAATTACGGTACAACGTCGCCGCGTTGTTTCAGTACCCCCGTCGCCGCAAACATAGGGACTCACAGAGTTTTTA
TCTAACCGGAGCCTGGACAATGGCAAAGAAAGCAAAGCGTTTCCGTATCGGGGTGGAAGGTGCCACCACGGACGGGCGCA
CCATCGAACGCAGCTGGCTGGAGCAGATGGCGGCCAATTACGATCCGGCTGTTTACACCGCCGTGATCAACATGGAGCAC
ATCAAGGGTTACACCCCTGACAGCGCGTTTCGCCGTTTCGGTGTGGTCGATGCGCTGGACACCGAGGAAATCAGTGACGG
CCTGCTGAAAGGCAAGCTGGGCCTGTACGCAGTAATTAACCCGACGGATGAGCTGGTCACGATGACCGGCAACATGCAGA
AGCTTTTCACCTCAATGGAGATTCGCCCGGAGTTCGCCGACACCGGCGAGGCGTATCTGATTGGCCTCGCTGTGACCGAC
GATCCGGCCAGCCTCGGCACCGAAATGCTGCAGTTCAGCGCCAGTGCAGGCGCTAATCCGCTGGCAAACCGCAAGCAGCA
TCCTGACAACCTGTTTACCGCCGCCGCCGAAACCGTGATTGAGTTTGAGGACGAGGCCGACGAAAAACCGTCGCTTTTCA
GCCGCGTATCCGCACTTTTCAGCAACAAGCAGAAATCGGATGACGCTCGTTTCAGCGACGTTCACAGGGCGGTCGAGCTG
GTCGCCACCGAGCAGCAGGCATTCAGCCAGCGCATCGAAACCGCTTTGAGCGAGCAGGCCAGCAGCCTGCAGGCGCATTT
CACCGAAGCGCTGAGCGCAGAAGCTGCAGCGCGTGAGCAGCTGCAGGCGGATTTCAGCCAGCTGCAGGCACAGCTGAGCC
GTGAAGACGGGCGGCAGGACTCCCGTCCGCGCACTCCCGGTAACGGCAACGGCAGCAGCCAGGACGTGCGCACCGACTGC
TGA

Protein sequence :
MCELRYNVAALFQYPRRRKHRDSQSFYLTGAWTMAKKAKRFRIGVEGATTDGRTIERSWLEQMAANYDPAVYTAVINMEH
IKGYTPDSAFRRFGVVDALDTEEISDGLLKGKLGLYAVINPTDELVTMTGNMQKLFTSMEIRPEFADTGEAYLIGLAVTD
DPASLGTEMLQFSASAGANPLANRKQHPDNLFTAAAETVIEFEDEADEKPSLFSRVSALFSNKQKSDDARFSDVHRAVEL
VATEQQAFSQRIETALSEQASSLQAHFTEALSAEAAAREQLQADFSQLQAQLSREDGRQDSRPRTPGNGNGSSQDVRTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 6e-82 61
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 6e-82 61
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 1e-44 43