Gene Information

Name : W (PANA_3143)
Accession : YP_003521438.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3628
EC number : -
Position : 3528238 - 3528594 bp
Length : 357 bp
Strand : -
Note : Baseplate assembly protein W; Similar to Pantoea sp. At-9b, GPW/gp25 family protein (NCBI: ZP_05730484.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
GTGATGTATCTCGGCATGAACCGCGACACCGGCAAAGCGATTACCGATATCGATCACATTCGTCAGAGCGTCAGCGACAT
TCTGCTGACCCCGGAGGGCAGCCGTCTGGCGCGCCGTGAATACGGCTCCATGCTTTCCGCGCTCATCGATCAGCCGCAGA
ACGGCGTCACCCGTATGCAGGTCATGGCGGCAGCCTATACCGCGCTGAGCCGCTGGGAGCCGCGCATTCGGCTGATTTCA
GTGAATTTCACTACGGCTTATGACGGTTCGATGGCTGTTGAGATTAACGCACAGCGTGCCGACGGCTCGCCGCTGGCAAT
GACCATACCAACGGGGGTGAACCGTGGCAGTGATTGA

Protein sequence :
MMYLGMNRDTGKAITDIDHIRQSVSDILLTPEGSRLARREYGSMLSALIDQPQNGVTRMQVMAAAYTALSRWEPRIRLIS
VNFTTAYDGSMAVEINAQRADGSPLAMTIPTGVNRGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4308 NP_807904.1 phage baseplate assembly protein Not tested SPI-7 Protein 9e-35 59
STY4614 NP_458696.1 phage baseplate assembly protein Not tested SPI-7 Protein 9e-35 59
unnamed ABR13479.1 predicted baseplate Not tested PAGI-6 Protein 4e-16 51