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Name : lysS (PANA_3127) Accession : YP_003521422.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Virulence Product : LysS Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 3511361 - 3512881 bp Length : 1521 bp Strand : - Note : Lysyl-tRNA synthetase; Similar to Pantoea sp. At-9b, lysyl-tRNA synthetase (NCBI: ZP_05731443.1); COG: Translation, ribosomal structure and biogenesis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic DNA sequence : ATGTCTGAACAACAACCGCAGAGCGCTGACGTCGCACTTGAGTTAAATAACGAACTGAAAACGCGTCGCGAGAAGCTGAG CGTGCTGCGTGAAAACGGCGTGGCGTTTCCTAACGATTTTCGTCGTGATACCACCTCCGATCGGCTGCATGCCAGCTATG ACGAGAAGAGTAACGAAGAGCTGGAAGACTTAGGCATTGAGGTCAGCGTGGCTGGCCGTATGATGACGCGCCGTATCATG GGCAAGGCGTCTTTCATTACCCTGCAGGACGTGGGCGGCCGCATTCAGCTGTACGTGGCACGTGACGATCTGGCTGAAGG TATCTACAACGAGCAATTCAAAAAATGGGACCTGGGCGATATCCTCGGCGCACGCGGTAAGCTGTTCAAAACCAAAACCG GCGAATTGTCGATTCACTGCTCAGAGCTGCGCTTGTTAACGAAAGCCCTGCGCCCGCTGCCAGACAAATTTCACGGTCTG GCCGATCAGGAAACGCGCTATCGTCAGCGCTATCTTGATCTGATCGCCAACGATGAATCACGCAACACCTTCAAAATCCG TTCGCAGATCATGGCCGGCATTCGTCAGTTCATGGTTGGACGCGATTTTATGGAAGTGGAAACGCCAATGATGCAGGTGA TCCCGGGCGGCGCTTCAGCGCGTCCGTTTATCACGCATCACAACGCGCTGGATATCGATATGTATCTGCGTATTGCGCCA GAGCTGTATCTGAAACGCCTGGTGGTGGGCGGTTTCGATCGCGTGTTCGAGATCAACCGTAACTTCCGCAACGAGGGGAT TTCGCCTCGTCACAACCCAGAGTTCACCATGATGGAACTCTATATGGCTTATGCGGATTACAAAGACCTGATTGAACTGA CCGAAAGCCTGTTCCGTACGCTGGCGCAGGATATCCTGGGCAGCACGGTTGTGCCTTACGGTGAGCAGGAATTCGATTTT GGTAAGCCGTTTGAAAAACTCACCATGCGTGAAGCGATCAAGAAGTACCGTCCGGAAACCGATCTGGCCGATCTTGACGA TTTCGACAAAGCGGTGGCGATTGCTCAGACCATTGGCATCAAAGTCGAGAAAAGCTGGGGCTTAGGGCGCGTAGTGACCG AAATTTTTGAAGAAACTGCTGAAGCACACCTGATTCAGCCAACCTTCATTACCGAGTATCCGGCTGAAGTGTCGCCGCTG GCCCGTCGCAACGACGAAAATCCTGAGATCACCGATCGCTTTGAGTTCTTTATTGGCGGACGTGAAATCGGCAACGGTTT CTCTGAGCTTAACGATGCGCAGGATCAGGCTGAGCGTTTCCTGCAGCAGGTGAATGCGAAAGATGCGGGCGATGATGAAG CGATGTTCTACGACGAGGATTATGTCACCGCCCTGGAACATGGTTTACCGCCAACGGCAGGCTTAGGCATTGGTATTGAC CGCATGGTCATGCTGTTTACCAACAGCCACACCATCCGCGACGTAATTCTGTTCCCGGCGTTGCGCCCAGGCTCAAAGTA A Protein sequence : MSEQQPQSADVALELNNELKTRREKLSVLRENGVAFPNDFRRDTTSDRLHASYDEKSNEELEDLGIEVSVAGRMMTRRIM GKASFITLQDVGGRIQLYVARDDLAEGIYNEQFKKWDLGDILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRNTFKIRSQIMAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP ELYLKRLVVGGFDRVFEINRNFRNEGISPRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGSTVVPYGEQEFDF GKPFEKLTMREAIKKYRPETDLADLDDFDKAVAIAQTIGIKVEKSWGLGRVVTEIFEETAEAHLIQPTFITEYPAEVSPL ARRNDENPEITDRFEFFIGGREIGNGFSELNDAQDQAERFLQQVNAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPALRPGSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-169 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003521422.1 | LysS | VFG1668 | Protein | 3e-169 | 69 |
