Gene Information

Name : rplS (PANA_3020)
Accession : YP_003521315.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : RplS
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 3392759 - 3393106 bp
Length : 348 bp
Strand : -
Note : 50S ribosomal protein L19; Similar to Cronobacter turicensis, 50S ribosomal protein L19 (NCBI: YP_003211556.1); COG: Translation, ribosomal structure and biogenesis; Subcellular localization as predicted by Psort 2.0: Cytoplasmic

DNA sequence :
ATGAGCAACATTATTAAGCAAATTGAACAAGAGCAGATGAAACAGGACGTACCTTCCTTCCGTCCGGGTGATACCGTGGA
AGTGAAAGTATGGGTCGTTGAAGGTTCTAAAAAACGTCTGCAGGCATTCGAGGGCGTGGTTATCGCTATTCGTAACCGCG
GTCTGCACTCTGCATTCACTGTTCGCAAAATTTCTAACGGCGAAGGCGTTGAGCGTGTCTTCCAGACTCACTCTCCGGTA
ATTGACAGCATCGCTGTTAAACGTCGTGGCGCTGTGCGTAAAGCCAAACTGTACTACCTGCGTGAGCGTACTGGTAAGTC
TGCTCGTATCAAAGAGCGTCTTAACTAA

Protein sequence :
MSNIIKQIEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPV
IDSIAVKRRGAVRKAKLYYLRERTGKSARIKERLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-41 96
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-24 63