Gene Information

Name : nrdE (PANA_2991)
Accession : YP_003521286.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : NrdE
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : -
Position : 3351796 - 3353934 bp
Length : 2139 bp
Strand : +
Note : Ribonucleoside-diphosphate reductase 2 alpha subunit; Similar to Pantoea sp. At-9b, ribonucleoside-diphosphate reductase, alpha subunit (NCBI: ZP_05727853.1); COG: Nucleotide transport and metabolism; Subcellular localization as predicted by Psort 2.0: Un

DNA sequence :
TTGGCAACGACAGATACCCTCAACGACGTAGCGCTGGATTACCATGCGCTGAACGCCATGCTGAACCTGTATGACGCTGA
CGGCCGTATCCAGTTTGACAAGGATCAGCAGGCCGCACGTCAGTTTGTTATTCAGCACGTGCAGCCCAACACCCAGCACT
TTGCCAGCATCGCCGAGCGCCTGCGCTATCTGGTCGCCGAAGGCTACTACGAAGCTTCCGTACTTAATCAGTATGATTTT
AACTTTGTCTGCGGACTGCACGACGAAGCCGATGCATGGGGCTTTGCGTTCAAGACCTTTTTGGGTGCGTGGAAGTACTA
CACCAGCTACACCCTGAAAAGTTTTGATGGCAAGCGTTACCTGGAAACCTTCGAGCAGCGTGCCTGTATGGTGGCGCTGA
CGCTGGCACAGGGCGATGAAACCCTGGCGCGCTCGGTGCTGGAAGCCATCCTGAGTGGCCGTTTTCAGCCCGCCACGCCG
ACGTTTCTGAACAGCGGCAAGCAACAGCGCGGCGAACTGGTTTCCTGCTTCCTGCTGCGCATTGAAGACAACATGGAGTC
GATTGGCCGGGCCGTGAACTCTGCGCTCCAGCTGTCAAAACGCGGCGGCGGCGTAGCGTTTCTGCTGTCGAACCTGCGTG
AGTCCGGCGCGCCGATCAAGCGCATTGAAAACCAGTCTTCCGGCGTTATTCCGGTGATGAAAATGCTGGAGGATGCGTTT
TCTTATGCTAACCAGCTCGGCGCGCGTCAGGGAGCCGGCGCAGTCTGGCTGAATGCTCACCATCCGGATATTTTGCGCTT
CCTGGATACCAAGCGCGAAAACGCCGATGAAAAAATCCGCATTAAAACGCTGTCGCTGGGCGTGGTCATTCCGGATATCA
CCTTCCAGCTTGCCAAAGAGAATCAGCCGATGGCGCTGTTCTCGCCCTACGATGTTGAAAGAATCTACGGTCAGGCGTTT
GGCGATATTAGCATCAGCGAGAAATACGCGGAGATGCTGGCGGACGACAGAATCCGTAAAACCTATATTCAGCCGCGCGA
TTTCTTTCAGACGCTGGCGGAAATCCAGTTCGAATCAGGCTATCCCTACATCATGTATGAGGACAGCGTAAACCGGGACA
ACCCGATTGCCGGTCGCATCAATATGAGCAACCTCTGCTCAGAGATTTTGCAGGTGAACAGCGCCAGCGAATTCAACGAG
GATCTCAGCTACCGCCGCATGGGCAAAGATATCTCCTGTAACCTTGGCTCGCTGAATATCGCCCATGCGATGGATTCTGG
CGATCTGGCCCACACGGTGGAAACGGCAATTCGGGCGCTAACTGCGGTGTCAGATATGAGTGACATTGGCTCGGTTCCCT
CCGTTGCGGAAGGCAATCGCCGCTCGCATGCTATCGGTCTGGGTCAGATGAACCTGCATGGTTACCTGGCCCGTGAAGGC
ATTACTTACGGATCACCCGAGGCGCTGGATTTCACCAATCTCTATTTTTACTGTGTGACTTATTATGCCCTGCGTGCCTC
GAATCAGCTGGCAAAAGAGCGCCAGCAGACTTTCGACGGTTTTAGCGCCTCAACCTATGCCACCGGCGCGTATTTTGACA
AATATCTGCAAAGCGACTGGCAGCCGCGAACCGCCCGCATCGCCGCCCTGTTTGCCGATGCGGGCATCAGCTTGCCCTGT
CACAACGACTGGCTGGCACTGCGTGAATCGGTGATGGCCTCGGGGCTGTATAATCAAAACCTGCAGGCGATACCGCCTAC
CGGATCGATCTCCTATATCAACCACGCCACGTCCAGTATTCATCCGATTGTGTCGCGAATAGAGATCCGCAAAGAGGGCA
AAACCGGTCGCGTTTACTATCCGGCTCCCTTCATGACCAACGACAATCTGGAACTCTATCAGGACGCTTACCAGATTGGG
CCGGAAGCCATTATTGATACCTACGCAGAGGCGACCCGACATGTGGATCAGGGCCTGTCATTAACCCTGTTTTTCCGGGA
TGACGTGACCACGCGCGACATTAATAAAGCGCAGATTTACGCCTGGAAGAAAGGGATTAAAACGCTTTACTACATTCGAC
TGCGCCAGATGGCCCTGCAAGGCACTGAAATTCAGGGCTGCGTCTCCTGCGCACTGTGA

Protein sequence :
MATTDTLNDVALDYHALNAMLNLYDADGRIQFDKDQQAARQFVIQHVQPNTQHFASIAERLRYLVAEGYYEASVLNQYDF
NFVCGLHDEADAWGFAFKTFLGAWKYYTSYTLKSFDGKRYLETFEQRACMVALTLAQGDETLARSVLEAILSGRFQPATP
TFLNSGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLRESGAPIKRIENQSSGVIPVMKMLEDAF
SYANQLGARQGAGAVWLNAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFQLAKENQPMALFSPYDVERIYGQAF
GDISISEKYAEMLADDRIRKTYIQPRDFFQTLAEIQFESGYPYIMYEDSVNRDNPIAGRINMSNLCSEILQVNSASEFNE
DLSYRRMGKDISCNLGSLNIAHAMDSGDLAHTVETAIRALTAVSDMSDIGSVPSVAEGNRRSHAIGLGQMNLHGYLAREG
ITYGSPEALDFTNLYFYCVTYYALRASNQLAKERQQTFDGFSASTYATGAYFDKYLQSDWQPRTARIAALFADAGISLPC
HNDWLALRESVMASGLYNQNLQAIPPTGSISYINHATSSIHPIVSRIEIRKEGKTGRVYYPAPFMTNDNLELYQDAYQIG
PEAIIDTYAEATRHVDQGLSLTLFFRDDVTTRDINKAQIYAWKKGIKTLYYIRLRQMALQGTEIQGCVSCAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 71