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Name : papC (PANA_2724) Accession : YP_003521019.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Virulence Product : PapC Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3061237 - 3063711 bp Length : 2475 bp Strand : - Note : Outer membrane usher protein PapC precursor; Similar to Serratia entomophila, SefC (NCBI: NP_938127.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Outer Membrane DNA sequence : ATGGGTAATCCACAACTATTACATCGATATTGTCTTTTTTTTAGCGTTTTAATAACGATGTCGGGTTATTGCGGCGATAC ACGCGCTGTTGAATTTAATACTGACATTCTTGATGCCGAAGATCGAAATAATATTGATTTATCCCGTTTCGCCCGTGCGG GTTACATCATGCCGGGTACCTATAGTCTCACACTTCGGTTGAATGAGCGGAATATCATTGAACAGGAGGTGGTGTTTAAA GAGAAGAAAGGTGCCGAAGAAGTGCAGGCCTGTCTGACGCCTCAGCAGGTTGAGTTACTCGGTCTTAAGCACGATGCGCT GGCAAAGATAAGCTTTGACCATAATGACGACTGCGCTGATTTTTCCGCGCTGGACGGTGTCAGGCTGCGCGGCGATCTTT CAACCTCGTCGCTCTATATTTCGGTACCCCAGGCCTGGCTCGAATATCAGGATGCCACCTGGCTGCCGCCTTCACGCTGG GAGAATGGCGTACCGGGGGTGATGCTGGATTATAACATCAATACCAGCTTCACCCGTACGGTACACGGCAGTCAGTCACA GCGAGCCAGTGCCACCGGTACGCTCGGTGCAAACAGCGGCCCCTGGCGTTTGCGGGGCGACTGGCAGGCTAACTACAACA AGACCGGCGGCTCCAGCGGTGGCACGACCCAACGTATCGACTGGAGTCGCTTTTACCTTTATCGCGCGCTGCCGTCGCTT ATGGCGAAACTCACCCTGGGTGAGGATTATCTTCGATCGGATATTTTTGATACATGGCGCTTCACCGGCGTGTCATTGGT CAGCGATGAAAGCCAGCTTCCCCCCAGGCTGCGCGGCTACGCGCCGGAGGTGAGCGGCATTGCACGCACCAATGCCAAAG TCATCGTCAGCCAGCAGGGACGGATCATTTACGAAACCATGGTGGCGGCAGGACCGTTCCGCGTGCAGGAACTCAGCAGT GCGGTGAGTGGGCAACTGGACGTAAAGGTGGAAGAGCAGGACGGTAGCGTACAACACTTTCAGGTCACCACCGCCACCGT GCCCTATCTGACCCGGCCGGGCCAGGTGCGTTACAAGCTGGCCACCGGGCGACCCTCCGATTTCCACCACCATGTGCAAG GGCCGACATTTGGCACCGCCGAAATATCATGGGGCGTGGCTAACAGTTGGTCACTGTATGGCGGGAGTATTTTCTCTGCG GACTATCACAGTCTGGCCATTGGTGTGGCTCGTGATCTTTACCGGTTTGGTGCGCTCTCAGCGGATATCACCCAGTCTGC AACATCGTTACCGGACAGGGGACATTTACAGGGCCGTTCCTACCGTTTGAGTTATTCAAAGCGCTTTGACGACTTCAACA GCGATTTGACCTTTGCGGGCTACCGTTTTTCCGAACGCAATTACATGACCATGACGGAGTACCTTGACGCGCGCTATCGC AATGGCGTAACGGGCAGCAGTAAAGAACTTTATACCGTTACGGCGAGCAAAAGTTTTACGGATCTCAACCTTTCTGCCTA CCTGAGCTGGTCTCACCAGACGTACTGGGAGCGCCCGCGTGCCGACCGTTACAGCCTTTCTGCCAGTCGTTATTTCGATC TGAACCGTTGGCGCAATCTGTCCGCCACCGTTTCCGCCGTGCGAACGCGCGATTACGGCCGTAAGGATGATGCGCTCTGG CTAACGATAAGTGTTCCTTTTGGTCAGGGGACGGCCAGCTACAACGGCAACTGGAGTCAACAGACTTACAGCCAAACCGC AGGATGGTATGAACGCCTGGAAAACGGTGACAGTTATCGCCTGTCGGCCGGAACGCGAAGCGGAAAAAGCGAGAGCATCA CGACCCAGGCGAGCGGGCTGTACAGCCACACAGGAACGGCTGCAGACATCACCGCCAATCTGGACTGGCAGCAGAACGGC TATACCTCAGCGGGCTTGTCGATTAGCGGCGGCCTGACAGCGACCAGCGAAGGGGGCGCGCTCCATGGCAGCAGCGTCAG AGGAGGCACCCGAGTGTTGGTCAGCACCGATGGCGTGGCGAATGTGCCGGTGGGCCGTAATGGCATGACCAACCGATTTG GCCTGGCCGTGGAACCCTCCGTACCCGGCTACTATCGCGCCACGGTCAAGGTAGATGTGAATCGGTTGCCGGATGACATC GAAATCAGTAGCGCGCCCGTTGCGGAAGTTTCACTGACCGAAGGGGCGATTGGTTTCCGCCGTTTTGACGTGCTCAAGGG TGCGAAAGTCGTGGCGACTGTCGCGATGGCTGACGGCACTTTTCCTCCTTTCGGGGCCAGCGTGCGCAATGCAAAAGATC AGGAGTTAGGCATGGTGAGTGAAGCGGGCTTAGCCTGGATTTCAGGGGTTAAACCCGACGAGGTGCTGACGCTGTTCTGG GGCGACAAGGCACAGTGCCGGGCAACGCTTCCGTCACTCATCCCCGACAGTCAACTGCTGCTGCCCTGCGAGTAA Protein sequence : MGNPQLLHRYCLFFSVLITMSGYCGDTRAVEFNTDILDAEDRNNIDLSRFARAGYIMPGTYSLTLRLNERNIIEQEVVFK EKKGAEEVQACLTPQQVELLGLKHDALAKISFDHNDDCADFSALDGVRLRGDLSTSSLYISVPQAWLEYQDATWLPPSRW ENGVPGVMLDYNINTSFTRTVHGSQSQRASATGTLGANSGPWRLRGDWQANYNKTGGSSGGTTQRIDWSRFYLYRALPSL MAKLTLGEDYLRSDIFDTWRFTGVSLVSDESQLPPRLRGYAPEVSGIARTNAKVIVSQQGRIIYETMVAAGPFRVQELSS AVSGQLDVKVEEQDGSVQHFQVTTATVPYLTRPGQVRYKLATGRPSDFHHHVQGPTFGTAEISWGVANSWSLYGGSIFSA DYHSLAIGVARDLYRFGALSADITQSATSLPDRGHLQGRSYRLSYSKRFDDFNSDLTFAGYRFSERNYMTMTEYLDARYR NGVTGSSKELYTVTASKSFTDLNLSAYLSWSHQTYWERPRADRYSLSASRYFDLNRWRNLSATVSAVRTRDYGRKDDALW LTISVPFGQGTASYNGNWSQQTYSQTAGWYERLENGDSYRLSAGTRSGKSESITTQASGLYSHTGTAADITANLDWQQNG YTSAGLSISGGLTATSEGGALHGSSVRGGTRVLVSTDGVANVPVGRNGMTNRFGLAVEPSVPGYYRATVKVDVNRLPDDI EISSAPVAEVSLTEGAIGFRRFDVLKGAKVVATVAMADGTFPPFGASVRNAKDQELGMVSEAGLAWISGVKPDEVLTLFW GDKAQCRATLPSLIPDSQLLLPCE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 52 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 0.0 | 50 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 50 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 0.0 | 50 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 0.0 | 50 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 0.0 | 50 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| papC | YP_003521019.1 | PapC | VFG1548 | Protein | 0.0 | 50 |
| papC | YP_003521019.1 | PapC | VFG0884 | Protein | 0.0 | 50 |
| papC | YP_003521019.1 | PapC | VFG0895 | Protein | 0.0 | 50 |
