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Name : yfcS (PANA_2717) Accession : YP_003521012.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3057435 - 3058205 bp Length : 771 bp Strand : - Note : Fimbrial Chaperone; Similar to Providencia rettgeri DSM 1131, hypothetical fimbrial chaperone yfcs (NCBI: ZP_06125306.1); COG: Cell motility and chemotaxis; Subcellular localization as predicted by Psort 2.0: Periplasmic DNA sequence : ATGTGGACAAAAGCGATATTGATAAAGCTCTGGGCCATTCTGGCGCTGGCAGGCAGTGTGAATGCCCATGGCGCGCTGAC GGTTGATCGATCGCGCCTGATCCTTAATCAGGGGGAAAAGTCGATCAGCCTGAACGTAACCAACCGCAATGAAAAAGATC CCTACTTGGCGCAGGGCTGGATGGAAGATGTAGACGGAAAAAAAATCAGCGGTCCGCTGATGGTATTGCCGCCGGTGCAG CGTGTTGAAGCGGGCGGCAAGACGCTGGTGCGTATTCAGGTTCTCCCGGCCATCTCGTCGCTGCCGACAGACAGGGAAAG CGTTTTCTACCTTAATCTGCGGGAAATACCGCCAAAATCGGCTAAAGCCAACGTTCTGACGCTGGCGATGCAGATCCGGC TCAAAGTCTTCTATCGCCCTAAAGGACTGAACGTGGATCCGATGTCAGATACGGTTCCCGGCACGGAAACCCTGACGCTG ATTAAGCAGGGAAACCAGTATGAAGTGCACAACCCAACGCCCTACCATTTTTCCTTCGTCGAAGTCAGACGAAGCCTGAC CGGAAGCGGACTGGCACGTTTTGAACCCGTCATGGTGGCACCGAAAAGCCGCCAACTGCTCAGTCCGACCGTCAGTGAGT TAGGCAGCACGCCGGTTCTGATGTTCGTCAGCGATTACGGCAGCCAACGGTTGTTGCCGTTTATTTGCAACGGCAACACC TGCCAGGCAGAGAAATCGCGCATACCGGATGAGATTTCCTTTAGGCAATAG Protein sequence : MWTKAILIKLWAILALAGSVNAHGALTVDRSRLILNQGEKSISLNVTNRNEKDPYLAQGWMEDVDGKKISGPLMVLPPVQ RVEAGGKTLVRIQVLPAISSLPTDRESVFYLNLREIPPKSAKANVLTLAMQIRLKVFYRPKGLNVDPMSDTVPGTETLTL IKQGNQYEVHNPTPYHFSFVEVRRSLTGSGLARFEPVMVAPKSRQLLSPTVSELGSTPVLMFVSDYGSQRLLPFICNGNT CQAEKSRIPDEISFRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 7e-44 | 44 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 3e-39 | 43 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 7e-44 | 42 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-44 | 42 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 5e-44 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 7e-44 | 42 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 7e-44 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 7e-44 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfcS | YP_003521012.1 | hypothetical protein | VFG0885 | Protein | 1e-39 | 43 |
| yfcS | YP_003521012.1 | hypothetical protein | VFG1547 | Protein | 4e-44 | 42 |
| yfcS | YP_003521012.1 | hypothetical protein | VFG0896 | Protein | 3e-44 | 42 |
