Gene Information

Name : yejF (PANA_2573)
Accession : YP_003520868.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2878526 - 2880130 bp
Length : 1605 bp
Strand : +
Note : hypothetical ABC transporter ATP-binding protein YejF; Similar to Pantoea sp. At-9b, ABC transporter related protein (NCBI: ZP_05730918.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Inner Membrane

DNA sequence :
ATGAGCACCCCGCTGCTTGCTGTTAACCATCTCTCCGTCGCCTTTCGTCAGGGCAAACAGCTGTATCAGGTGGTGGACGA
TGTCTCGCTGCGTATAGAGGCAGGAGAAACCCTGGCCCTGGTGGGCGAATCCGGTTCCGGAAAAAGCGTTACCGCCCTGT
CGATCATGCGGCTGCTGCACGCGTCCGCCGTCGCCTATCCTCAGGGCGAAATTCTGCTGGCAGGCGAAGACCTGCTCAAG
GCGTCGGCGCAACGACTCCGCGGCCTGCGGGGTAATCAGATGGCGATGATTTTTCAGGAACCCATGGTGTCACTCAACCC
TTTGCACAGTATTGAAAAGCAGCTATATGAAGTGCTTTCTCTACATCGCGGCATGCGACGCGAGCCCGCGCGAGCGGAAA
TCCTGCGCTGCCTCGATCGCGTGGGTATTCGCCAGCCGGCCTCCCGCCTGAACGCTTTTCCACATCAGCTCTCCGGGGGC
GAGCGCCAGCGTGTGATGATCGCGATGGCCCTGCTGACCCAGCCGAGGCTGCTGATTGCCGATGAACCGACCACCGCGCT
TGATGTCACCGTTCAGGCGCAGATCCTTGGCCTGCTGCGCGAACTGCAACAGGAACTGAATATGGGCATGCTGTTTATTA
CCCATAACCTGAAGATTGTTCGCCAACTGGCAGACAGCGTCAGCGTGATGCGCTCTGGTCGGGTGGTTGAGCATAACGCC
GGCCAGCGCCTGCTAACACAGCCTCAGCACGCCTACACGAAACAGTTGCTGGCGGCCGATCCGGAAGGTCGTGCCGTGCC
GCTCCCTGCGGATACGCCGGTTATTCTTAAGGTGGACAACCTGCGCGTCAGTTTTCCCCTGCGTCAGGGCCTGTTTAAAC
GTAAAACAGGCGAAAAAATTGCAGTAGAGAATCTTAGCTTTAGCCTGAAACGAGGCGAAAGTCTGGGGTTGGTAGGCGAG
TCAGGCTCAGGAAAAAGCACCACCGGTATGGCGTTGTTGCGTCTTATTGCCGCTCAGGGGGAGGTCTGGTTTGACAATCA
ACCGCTGCATCAGCTGTCGAGAAAAGCGCTGTTGCCGCTGCGTCGCCGCATTCAGGTCGTTTTTCAGGATCCTAATTCTG
CGCTGAATCCCCGAATGACGGTTCAGCAGATCGTTGCCGAAGGTCTGGCCGTGCATTATCCACACCTGAGTGCCGCACAA
CAGGACGAACGGGTTAAAGCGGTCATGACCGAGGTCGGGCTGGACGCGGAAAGCCGCCATCGCTATCCAGCTGCGTTTTC
CGGCGGTCAGCGTCAGCGAATCGCTATTGCGCGCGCCCTGATTCTTGAACCGGAGCTGCTGATACTGGATGAGCCAACCT
CCTCACTCGACCGCTCCGTACAAAAACAGATTCTGACGCTGCTACGGGGATTACAGCAGCGGCGTCAGCTGAGTTATCTG
TTTATCAGTCACGATTTGGAAGTGGTGCGATCGCTCTGCCATCAGCTCATCGTACTGCGTCAGGGCGAGGTCGTTGAACA
AGGCGACTGTGAGACACTCTTTGCCACACCTGCACAGGCTTATACCCGCGAGCTGCTCGGCTCCGTTTCGCTCAGTGACC
GATGA

Protein sequence :
MSTPLLAVNHLSVAFRQGKQLYQVVDDVSLRIEAGETLALVGESGSGKSVTALSIMRLLHASAVAYPQGEILLAGEDLLK
ASAQRLRGLRGNQMAMIFQEPMVSLNPLHSIEKQLYEVLSLHRGMRREPARAEILRCLDRVGIRQPASRLNAFPHQLSGG
ERQRVMIAMALLTQPRLLIADEPTTALDVTVQAQILGLLRELQQELNMGMLFITHNLKIVRQLADSVSVMRSGRVVEHNA
GQRLLTQPQHAYTKQLLAADPEGRAVPLPADTPVILKVDNLRVSFPLRQGLFKRKTGEKIAVENLSFSLKRGESLGLVGE
SGSGKSTTGMALLRLIAAQGEVWFDNQPLHQLSRKALLPLRRRIQVVFQDPNSALNPRMTVQQIVAEGLAVHYPHLSAAQ
QDERVKAVMTEVGLDAESRHRYPAAFSGGQRQRIAIARALILEPELLILDEPTSSLDRSVQKQILTLLRGLQQRRQLSYL
FISHDLEVVRSLCHQLIVLRQGEVVEQGDCETLFATPAQAYTRELLGSVSLSDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-63 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-63 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 7e-72 41