Gene Information

Name : PANA_2366 (PANA_2366)
Accession : YP_003520661.1
Strain : Pantoea ananatis LMG 20103
Genome accession: NC_013956
Putative virulence/resistance : Virulence
Product : hypothetical Protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 2636881 - 2637423 bp
Length : 543 bp
Strand : -
Note : Similar to Pantoea sp. At-9b, type VI secretion protein, VC_A0107 family (NCBI: ZP_05728977.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown

DNA sequence :
ATGGAGAGAACCATGCCAACAATGAAGTCCAGTGGGCAGAAATTTATCGCCCGCAATCGCGCGCCACGCGTTCAGATTGA
ATATGACGTGGAAGTCTATGGCGCAGAACGTAAAATTCAGCTGCCATTCATCATGGGTGTTCTGGCCGATTTAGCCGGTA
AACCGCTGGAGCCGCAGGCCAGCGTTGACGACCGTAAATTCATGGAAATCGACATCGACAATTTCGATGAGCGTATGAAA
GCCATGAAGCCACGTGCGGCATTCCAGGTAGACAATACGTTGAACGGTGACGGCAAACTGAACATCGATCTGACCTTCGA
AAGCATGGACGATTTTTCTCCTGATGCCATTGCACGCAAAGTCGATCCACTCAACAGCCTGCTTGAAGCACGTACCCAGC
TCTCCAACCTGCTGACCTATATGGACGGCAAAAACGGCGCCGAAGAGCTGATCGGCAAGATTTTACAGGATCCGACACTG
CTGCAGGCCCTGTCACACGTGCCTAAGCAAACGGATGCCCCTGAAGGTAAGGAGGAGCAGTAA

Protein sequence :
MERTMPTMKSSGQKFIARNRAPRVQIEYDVEVYGAERKIQLPFIMGVLADLAGKPLEPQASVDDRKFMEIDIDNFDERMK
AMKPRAAFQVDNTLNGDGKLNIDLTFESMDDFSPDAIARKVDPLNSLLEARTQLSNLLTYMDGKNGAEELIGKILQDPTL
LQALSHVPKQTDAPEGKEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 6e-58 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PANA_2366 YP_003520661.1 hypothetical Protein VFG2069 Protein 2e-60 75