|
Name : thiC (PANA_0219) Accession : YP_003518514.1 Strain : Pantoea ananatis LMG 20103 Genome accession: NC_013956 Putative virulence/resistance : Unknown Product : ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 261628 - 263550 bp Length : 1923 bp Strand : - Note : Thiamine biosynthesis protein ThiC; Similar to Pantoea sp. At-9b, thiamine biosynthesis protein ThiC (NCBI: ZP_05732287.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown DNA sequence : ATGTCTACTGCTAAAACGACCCGTCGCGAACAACGTGCTCAGGCACAGGAATTCATTGACTCTCTTCAGGGCGGCAGCGC CTTCCCTAATTCAAAACGTATCTGGCTTACCGGCAGCCGCGATGATATCCGTGTCCCAATGCGGGAAATTCAACTCAGCC CTACCCTGACCAGCGGCAGTAAAGAAGCGCCGGTTTATGAGGAGAATGAGCCCGTTCCGGTTTACGATACGGCCGGTGCC TATGGCGATCCCGCCGCACAAATCGACGTGCATCGGGGGCTGGATAAACTGCGGGCGCGCTGGATTGAAGAGCGGAATGA CAGCGAAAATCTGGTGCAAATCAGCTCTGCCTACACGCAACAGCGGCTGGCCGATGACGGCCTGGATCACTTACGTTTTG AACACCTGCCCACACCACGCCGTGCGAAGGCAGGCCACTGCGTTACCCAGCTCCATTATGCTCGTCGGGGCATAATTACG CCGGAGATGGAGTTTATCGCGCTGCGGGAAAATATGGGCCGGGAACGCATCCGCGGCGAGGTGCTGCTGCAGCAGCATCC GGGGCACAGCTTTGGCGCCCATCTGCCAGAAAATATTACCCCTGAGTTTGTGCGTCAGGAAGTGGCTGCCGGGCGCGCTA TTATTCCGGCAAATATTAACCATCCCGAATCCGAACCCATGATCATCGGGCGTAACTTTCTGGTGAAAGTGAATGCCAAT ATCGGCAACTCAGCCGTGACCTCCTCGATTGAAGAAGAGGTTGAAAAGCTGGTGTGGTCAACGCGTTGGGGCGCCGATAC CGTCATGGATCTTTCCACCGGCCGCTATATCCACGAAACCCGTGAATGGATTTTGCGTAACAGCCCGGTGCCTATCGGTA CGGTACCGATCTATCAGGCGCTTGAGAAAGTTAACGGTGTGGCAGAAGATCTGAACTGGGAAATTTTCCGCGACACATTG CTGGAACAGGCCGAGCAGGGTGTGGATTATTTTACGATTCATGCAGGCGTGCTGCTGCGCTACGTGCCCATGACCGCGAA GCGCCTGACTGGGATTGTCTCGCGTGGTGGTTCCATTATGGCGAAGTGGTGCCTGTCGCATCACAGAGAGAGCTTCCTGT ATGAGCACTTCCGCGACATCTGTGAAATTTGTGCGGCCTACGACATCTCATTATCATTAGGTGACGGCCTGCGTCCGGGA TCGATTCAGGATGCCAATGACGAAGCGCAGTTTGCGGAACTGCACACCTTAGGTGAGCTGACGAAAATTGCCTGGGAATA CGACGTGCAGGTGATGATTGAGGGCCCCGGCCATATTCCCATGCAAATGATCCGTCGCAACATGACCGAACAACTGGAAC ATTGCCATGAAGCGCCGTTTTACACTCTGGGCCCCCTCACCACTGATATTGCTCCGGGTTACGATCACTTTACCTCCGGC ATTGGTGCCGCGATGATTGGCTGGTTCGGCTGCGCCATGCTGTGCTACGTCACGCCCAAAGAGCATTTAGGTCTGCCAAA CAAGGAAGATGTTAAACAGGGCTTAATCACGTACAAGATCGCCGCGCACGCAGCCGATCTGGCCAAGGGTCATCCGGGCG CGCAAATCCGCGACAATGCGATGTCCAAAGCACGTTTTGAGTTTCGCTGGGAAGACCAGTTTAATCTTGCACTGGATCCG CATACGGCCCGGGCTTACCACGATGAAACCCTGCCGCAGGAGTCCGGTAAGGTGGCCCACTTCTGCTCTATGTGCGGCCC CAAATTTTGCTCAATGAAAATTACCCAGGAAGTGCGTGACTACGCCGCAAGGCAGGAAGCCGAAGCCCAGGCGATTGAGG TGGGGATGGCGAAAATGTCTGATCATTTTCGTGAGCGCGGCGGTGAGCTGTATCACCCTGCGACCGCAATAAAGGAGGAA TAA Protein sequence : MSTAKTTRREQRAQAQEFIDSLQGGSAFPNSKRIWLTGSRDDIRVPMREIQLSPTLTSGSKEAPVYEENEPVPVYDTAGA YGDPAAQIDVHRGLDKLRARWIEERNDSENLVQISSAYTQQRLADDGLDHLRFEHLPTPRRAKAGHCVTQLHYARRGIIT PEMEFIALRENMGRERIRGEVLLQQHPGHSFGAHLPENITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNAN IGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLNWEIFRDTL LEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHRESFLYEHFRDICEICAAYDISLSLGDGLRPG SIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHIPMQMIRRNMTEQLEHCHEAPFYTLGPLTTDIAPGYDHFTSG IGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDP HTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAARQEAEAQAIEVGMAKMSDHFRERGGELYHPATAIKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 69 |
